Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0594 |
Symbol | |
ID | 4673706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 626264 |
End bp | 628666 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639837720 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_984917 |
Protein GI | 121593021 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.703125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGAT TCCAAGTGAA GAAAGTCGCC GTGCTCGGCG CGGGCGTGAT GGGCGCGCAG ATCGCGGCCC ACCTCGTCAA TGTGAAGGTG CCGGTGGTGC TGTTCGATCT CCCCGCCAAG GAAGGTCCGA AGAACGGCAT CGTCACCCGC GCGGTGGAGA ACCTCAAGAA GCTCAAGCCC TCGCCCCTGG GTGTGGCGGA CGACGCCGCG CTGATCCAGC AGGCGAACTA CGAGGAGAAC ATGGCGCTGC TGGGCGAGTG CGATCTCGTC ATCGAGGCCA TCGCCGAGCG CATGGACTGG AAGCTCGATC TGTACAAGAA GATCGCGCCG CACGTCGCAC CGCACGCCAT CGTGGCGTCC AACACCTCGG GCCTGTCGAT CACCCAGCTG TCCGAGGCGC TGCCCGACGC CATCAAGCCG CGCTTTTGCG GCATCCACTT CTTCAACCCG CCGCGCTACA TGGTGCTGGT GGAGCTGATC AACACCCCCA CCACCCGTCC CGAGGTGCTC GACCAGCTCG AAGCCTTCGT GACCAGCGGC TTGGGCAAGG GCGTGGTGCG CGCGCACGAC ACCCCCAACT TCATCGCCAA CCGCGTGGGC ATCGCCGGCA TGCTCTCCAC GATGAAGGAG GTGGAGAACT TTGGCCTGAC CTTCGACGTG GTGGACGATC TCACCGGCAA GAAGCTGGGC CGTGCCTCCA GCGGCACCTT CCGCACCGCC GACGTGGTGG GCCTGGACAC CATGGCCCAC GTCATCAAGA CGCTGCAGGA CAACCTGAAC GAGCAGACCG ACCCGTTCTA CGGCAGCTTC GGCACGCCCG CCGTGCTGCA AAAGCTGATC GAGCTGGGCC ACCTGGGCCA GAAGGCCAAG GCGGGCTTCT ACAAGAAGGT GGGGCGCGAC ATCCTGCGCT TCGAGCTGGA GAGCGAGGAA TATGTGCCCG CTGGCGCCAA GGCCGACGAG GTGTACGGCC GCATGCTCAA GAAGCCCGCC GCCGAGCGCC TGAAGCTGCT GCGCAACTCG CAAGGCGCGC AGGGCCGGTT CCTGTGGGCC ATCCTGCGCA ACAGCTTCCA CTACGCTGCG GTGCATCTGG CCACGATTGC CGACACCGCG CGCGATGTGG ACCAGGCCAT GCGCTGGGGC TTCGGCATGA GCCAGGGGCC GTTCGAGCTG TGGCAGGAGG CGGGCTGGCT GGAGGTGGCC AGGATGGTCC AGGAGGACAT TGACGCGGGC AAGGCACTGT CCAAGGCGCC GCTGCCCGAG TGGGTGTTCA AGGGCCCGGT GGCGGATGCC GGCGGCGTGC ACACGGCGCA GGGTTCGTGG AGCGCGCGCC AAGGCAAGTT CGTGCCGCGC CGCCAGTTGC CGGTGTACGA GCGCCAGTAC TTCCCCGAGA AACTGCTGGG CGAGGACAAC CTGCCCGACT GGCGCAAGGC CGGCACCACC ATCAGCGAGA CCGATGCGCT GCGCACCTGG ACGCTCGATG GCAAGGTATT GATCGCCTCC ATCCAGAGCA AGATGCACGC GATCAGCCCC GACGTGATGG AAGGCCTGAT GGAGGCCGTG GATCTGGCCG AGCGCGAGTA CGACGGCATG GTCATCTGGT CGGGCGACGC GCCGTTCAGC GTGGGCGCCG ACCTGCAGGC CACCATGCCT GCCTACGTGG TGGCCGGCAT TGCCGCCATC GAGGGCGTGG AGCATGAGCT GCAGAACCTG ATGCTGCGCC TGCGCTACGC CCAGGTGCCG GTGGTCTCGG CCATCCATGG CATGGCGCTG GGCGGCGGCT GCGAGCTGGC CGTGCACAGC GCACGCCGCG TGGCCCACAT GGAAAGCTAC ATCGGCCTGG TGGAAGTGGG CGTGGGCCTG GTGCCCGGCG CCGGCGGCCT GACCTACATC GCCCGCCGCG CGGCCGAGAA CGCCGCCGCC AGCACCGGCA AGGACCTCCT GCCCTTCCTG ACCGAAGGCT TCACCGCCGC GGCCATGGCC AAGGTAGGCA CCAGCGCCCT TGAGTCGAAG AAGCTCGGCT ACCTGCTCGA CAGCGACCTC ATCGTGCCGC ACAAGGACGA GGTGCTGTTC GTCGCCATCA ACGAAGCCAA GGCCATGGCC GCCAGCGGCT GGCGCGCGCC GATGAAGCGC CTGTTCCCCG TGGCCGGGCG CAGCGGCATC GCCACCATCC GCGGCTCGCT GGTGAACATG CGCGACGGCG GCTTCATCAG CGAGCATGAC CAGCACATCG CCACGCTGAT CGCCGAAGTG GTGTGCGGCG GCGACGTGGA CGCCGGCACG CTGGTGAGCG AGGAATACCT GATGGCGCTG GAGCGCAAGG CGTTCTGCGC CCTGATCGAG CACCCCAAGA CCCAGGAGCG CATCCTGGGC ATGCTCAACA CTGGCAAGCC GGTGCGTAAC TGA
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Protein sequence | MSRFQVKKVA VLGAGVMGAQ IAAHLVNVKV PVVLFDLPAK EGPKNGIVTR AVENLKKLKP SPLGVADDAA LIQQANYEEN MALLGECDLV IEAIAERMDW KLDLYKKIAP HVAPHAIVAS NTSGLSITQL SEALPDAIKP RFCGIHFFNP PRYMVLVELI NTPTTRPEVL DQLEAFVTSG LGKGVVRAHD TPNFIANRVG IAGMLSTMKE VENFGLTFDV VDDLTGKKLG RASSGTFRTA DVVGLDTMAH VIKTLQDNLN EQTDPFYGSF GTPAVLQKLI ELGHLGQKAK AGFYKKVGRD ILRFELESEE YVPAGAKADE VYGRMLKKPA AERLKLLRNS QGAQGRFLWA ILRNSFHYAA VHLATIADTA RDVDQAMRWG FGMSQGPFEL WQEAGWLEVA RMVQEDIDAG KALSKAPLPE WVFKGPVADA GGVHTAQGSW SARQGKFVPR RQLPVYERQY FPEKLLGEDN LPDWRKAGTT ISETDALRTW TLDGKVLIAS IQSKMHAISP DVMEGLMEAV DLAEREYDGM VIWSGDAPFS VGADLQATMP AYVVAGIAAI EGVEHELQNL MLRLRYAQVP VVSAIHGMAL GGGCELAVHS ARRVAHMESY IGLVEVGVGL VPGAGGLTYI ARRAAENAAA STGKDLLPFL TEGFTAAAMA KVGTSALESK KLGYLLDSDL IVPHKDEVLF VAINEAKAMA ASGWRAPMKR LFPVAGRSGI ATIRGSLVNM RDGGFISEHD QHIATLIAEV VCGGDVDAGT LVSEEYLMAL ERKAFCALIE HPKTQERILG MLNTGKPVRN
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