Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0590 |
Symbol | |
ID | 4673670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 622021 |
End bp | 623001 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639837716 |
Product | transposase, IS4 family protein |
Protein accession | YP_984913 |
Protein GI | 121593017 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.605879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.456772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCT CCCCGCCCAT GAAGCAAAGC AGCCTTGACC TGAAACTGAG CACCAAAAAG ACCCGCAAGC AAGAACTGCT GATCCAGATG GATTTGGTGG TTCCCTGGGC TGCTCTGGTC GAACTCATTG CGCCCTATTA CCCCGAAGGC AAGAACGGCC GCCCACCCTT TGCCCTGGAG ACCATGCTGC GCATCCACTG CATGCAGCAG TGGTTCACCC TGTCAGATCT GGCGATGGAA GAGGCCTTCT TTGACACCCC GATCTACCGG GAGTTTGCAA GTCTTGATGC CCATGGGAGG GTGCCTGACG AGAGCACCAT CCTGAGGTTT CGTCATCGGC TGGAGAAACA CAAGCTGGCC GAGCAGATTC TGGCCACTGT CAACGAGCTT CTGGCAGCCC AGGGCTTGCT GCTCAAGGCA GGCACTGCGG TCGATGCCAC ACTGATCGCA GCGCCTAGCT CTACCAAGAA CAAGGACAGA AAGCGCGATC CAGAGATGCA TTCGAGCCAA AAGGGCAACG AATGGCACTT TGGCATGAAG GCCCATATCG GCGTGGATGC GGACTCGGGA CTCGTGCATA CCGTCATAGG CACCTCGGGT AACGTGGCCG ACGTTGTAGA GGGCAACAGC TTGCTGCACG GGCAGGAGAC AGACGGGTTT GGTGATGCGG GCTACCAAGG TATCGACAAG CGCCCGGATG CCAAGGAGGC AGTGCGGTGG CACATCGCGA TGCGCCCAGG CAAACGCAGA GCGCTGGACA AAGAGAACAA CCCCGTTGAC GCGCTGATAG ACCAAGTGGA GAAGATCAAG GCGAGCATCC GTGCCAAGGT GGAGCATCCC TTCAGGGTGA TCAAACGACA GTTTGGATAC ACCAAGGTGC GCTACCGGGG ATTGAAGAAG AACACGTTGC AGCTCAAGAC GCTGTTTGCG CTGTCCAATC TTTGGATGGT GCGCCATCAA TTGCTGGAGG CGCAGGGATG A
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Protein sequence | MASSPPMKQS SLDLKLSTKK TRKQELLIQM DLVVPWAALV ELIAPYYPEG KNGRPPFALE TMLRIHCMQQ WFTLSDLAME EAFFDTPIYR EFASLDAHGR VPDESTILRF RHRLEKHKLA EQILATVNEL LAAQGLLLKA GTAVDATLIA APSSTKNKDR KRDPEMHSSQ KGNEWHFGMK AHIGVDADSG LVHTVIGTSG NVADVVEGNS LLHGQETDGF GDAGYQGIDK RPDAKEAVRW HIAMRPGKRR ALDKENNPVD ALIDQVEKIK ASIRAKVEHP FRVIKRQFGY TKVRYRGLKK NTLQLKTLFA LSNLWMVRHQ LLEAQG
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