| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0584 |
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| Symbol | |
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| ID | 4673553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 614930 |
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| End bp | 616297 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639837710 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_984907 |
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| Protein GI | 121593011 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.767498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0809109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT CCTTACATTT TTCAGATAAA AAATCCCAGT TGACGCCTGA TGCACAAGCG
CTGGATGCTG CGGATACAGT AGCAAAGCAC GACCTCGGCC GGGCCGGCCG CTGGGGGCTG
TGGGCGCTGG GCCTGGGCTT CGGCGGCTTC TTGCTGTGGG CCGCGCTGGC GCCGCTGGAC
GAGGGCGTGC CCGGGCCGGG CGTGGTGGCG CTGGACACCA AACGCAAGGC GGTGCAGCAC
CTGAGCGGCG GCATCGTGCA GCAGGTGCTG GTGCGCGAGG GCGACGAGGT CAAGGAGGGG
CAGCTCTTGA TCAAGCTCGA TGCGGCCGTG GCGCGCGCCA ATTACGAGTC GGTGCGCCAG
AGCTACCTGG GGCTGCTGGC CATGCAGGCG CGCCTGCAGG CCGAGCAGCT GGGCAAGCCC
GGCATCGCCT GGCCTGCCGA CCTGAAGGAG GCCGCATCGG ATCCGCTGAT CCAGCAGCAG
ATCCTGAACC AGGAGCAGCT GTTCCACACC CGCCGCAGCC TGCTGCGCTC GGATCTGCAG
TCGATCGAGG AAAACATCCA GGGCCAGGAA GGGCTGCTGC AGTCCTACGC CGGCATGCTG
GGCAACCGCA AGAACCAGCT GGCGCTGCTG CACGAGGAGT TGGGGCATCT GCGCGACCTG
GTCAAGGAGG GCTATGCGCC GCGCAACCGC CAGCTGGAGC TGGAGCGCTC GGTCGCGGAC
GTCAACACCT CGATCGCCGA TCTGCAGGGC AATACGCTGC GCGCGCGCAG CGCCATCTCG
GACCTGCGCC AGCGCGCGAT CTCGCGCCAG CAGGAATACC GCAAGGAAGT CGAGACGCAG
CTGGCCGACG TGAGCCGCCA GGTGCTGGTC GATGGCGAGA AATTCCGCGC CGTGCGCAAC
GACCTGGAGC GCACGGAGAT CCGCTCGCCC GCCGACGGCC AGGTGGTGGG CCTGGCCGTG
CAGACGGTGG GCGGCGTGGT GCAGCCGGGG CAAAAACTCA TGGACATCGT GCCCAAGGGC
GCGCCGCTGC TGCTGGAGGC GCGCGTGGCG CCGCACATGA TCGACCGCGT CAAGGCCGGC
ATGCCGGTGG ACGTGCGCTT TTCGTCGTTC GCCAATTCGC CCCAGTTGGT GGTGCAGGGC
GCGGTGGAGT CGGTGTCGGG CGACCTGCTG ACCGAGCCGC AGTCCAACGT CAGCTACTAC
CTGGCGCGCG TGCAGGTGAC GGGCGAGGGC GCCAAGGCCC TGGGCCAGCG CCAGCTGCAT
CCGGGCATGC CGGTGGAGGT GATCTTCAAG GGCGGCGAGC GCAGCATGCT GACCTATTTG
CTGCATCCGC TGACCAAGCG CCTGGCAGCC TCGATGACCG AGGAGTGA
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| Protein sequence | MAESLHFSDK KSQLTPDAQA LDAADTVAKH DLGRAGRWGL WALGLGFGGF LLWAALAPLD
EGVPGPGVVA LDTKRKAVQH LSGGIVQQVL VREGDEVKEG QLLIKLDAAV ARANYESVRQ
SYLGLLAMQA RLQAEQLGKP GIAWPADLKE AASDPLIQQQ ILNQEQLFHT RRSLLRSDLQ
SIEENIQGQE GLLQSYAGML GNRKNQLALL HEELGHLRDL VKEGYAPRNR QLELERSVAD
VNTSIADLQG NTLRARSAIS DLRQRAISRQ QEYRKEVETQ LADVSRQVLV DGEKFRAVRN
DLERTEIRSP ADGQVVGLAV QTVGGVVQPG QKLMDIVPKG APLLLEARVA PHMIDRVKAG
MPVDVRFSSF ANSPQLVVQG AVESVSGDLL TEPQSNVSYY LARVQVTGEG AKALGQRQLH
PGMPVEVIFK GGERSMLTYL LHPLTKRLAA SMTEE
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