| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0583 |
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| Symbol | |
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| ID | 4673547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 613154 |
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| End bp | 614878 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837709 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_984906 |
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| Protein GI | 121593010 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.020719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGA CCCCCGGATT TTTCGAGCGC AGCGAGTTGA CGCGGGCGCT GTGGGCCTTT
CGCCGCGAGT TTTTGGTGGT GGGCGTGTTC AGCATGGTGG CGAATGTGCT GCTGCTGGCG
CCCACGCTGT ACATGCTGCA GGTGTTCGAC CGCGTGATGC TCAGCCAGAG CGAGCTGACG
CTGCTGATGC TGTCGCTGAT CACCCTGTTC CTCTTTCTGG TCGGGGCGTT TTCGGAATGG
ATGCGCTCGC GCGTGCTGGT GCGCGCCGGC ATGCGGCTGG ACGGCATGCT CAGCACCCGC
GTGTTCAATG CCAGTTTCGA GACCAACCTG AAACAGCTGG GCGGCAGCAC GGCCAAGGCC
TTCGGCGATC TGGTGCAGGT GCGGCAGTTC CTCACGGGCA ACGGCATTTT TGCGCTGTTC
GACGCGCCCT GGGCGCCGGT CTATCTGGCG GTGCTGTTCT TCCTGCACCC CCTGCTCGGC
TATCTGGCGA TCTTCTTCGC GCTGGTGCAG GTGGCGCTGG TGTGGTTCAG CCACCGCCAG
ACCGTGACCC CTTCGGAGCA GGCCCAGGCC GCGGCCAGCG AGGAGACGCT GTACCTGCAA
AGCAAGCTGC GCAACGTGGA GGTGCTGGAG CCCATGGGCA TCGTGCACAA CCTGCGCGCG
CGCTGGCTGG CCAAGCACGG CCAGGCCCAG CGGCTGCAGG GCCAGGCGCA GGCGGTGACG
CACCGCATCA CCGCCTGGAG CAAGTTCATC CGCTACTCGC AGCAGTCGCT GGCGCTGGGC
GCCGGCGCCC TGCTGGTGAT CGACGGCCAG CTCTCTCCGG GCGCGATGAT CGCCGCCAAC
GTGCTGATGA CGCGCGCGCT GGCGCCCATC GACCTGCTGG TCAGCACCTG GCGCGGCTTC
ATGGTCGCGC GCTCCGCCTT CGAGCGGCTG GAGGCGCTGC TGGAGGGCAA CCCCGAGCGC
GACCCCGCCC TGACCCGCGT GCCGCCCACG GGCGCGCTGC TGCTGCGCGA CGTGGTGGCG
GTGGCGCCGG GGCGCTCCGA GCCGATCCTC AAGGGCGTCA GCCTGCAGGC GCAGCCCGGC
ACGGCCACGG TGGTGCTGGG GCCTTCGGGC TCGGGCAAGT CCACGCTGGC GCGCTGCATG
ATCGGCATCT GGCCCCATAT GGAAGGCGAG GTGCTGCTCG ACGAGCGCCC GATCGCCGGC
TGGAACCGCG ACGAGCTCGG GCCCTACCTC GGCTATCTGC CGCAGGACAT CGAGCTGTTC
GAAGGTTCGA TCGCCGAGAA CATCGCGCGC TTCGGCGAGG TCGATGCCGA GAAGGTGATC
GCCGCGGCCC GCAATGCCGG GCTGCACGAC ATGATCCTGC GCTTTCCCAA GGGCTACGAC
ACCCCGATCG GCGAGGCCGG GGGGCTGCTG TCGGGCGGCC AGCGCCAGCG CATCGGCCTG
GCGCGGGCGA TCTATGGCGA TCCGGCGCTG GTGGTGCTCG ACGAGCCGAA TGCCAACCTG
GACGACGTGG GCGAGGCCGC GCTGGTGCGC GCGGTGCAGA CCCTCAAGGC CCGGGGCAGC
ACGGTGGTGC TGGTCACGCA CCGCCCCGGC ATCCTGGCCG TCGCCGACCG GCTGGTGATC
CTGAAGAACG GCAGCGTGCA GGCCGACGGG CCGCGCGATG CGGTGCTGGC GGCCTTGCGC
AATGCCCAGT CCCCGGCGGC CCAGGCATCG CTGGCCGTGG CCTGA
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| Protein sequence | MMTTPGFFER SELTRALWAF RREFLVVGVF SMVANVLLLA PTLYMLQVFD RVMLSQSELT
LLMLSLITLF LFLVGAFSEW MRSRVLVRAG MRLDGMLSTR VFNASFETNL KQLGGSTAKA
FGDLVQVRQF LTGNGIFALF DAPWAPVYLA VLFFLHPLLG YLAIFFALVQ VALVWFSHRQ
TVTPSEQAQA AASEETLYLQ SKLRNVEVLE PMGIVHNLRA RWLAKHGQAQ RLQGQAQAVT
HRITAWSKFI RYSQQSLALG AGALLVIDGQ LSPGAMIAAN VLMTRALAPI DLLVSTWRGF
MVARSAFERL EALLEGNPER DPALTRVPPT GALLLRDVVA VAPGRSEPIL KGVSLQAQPG
TATVVLGPSG SGKSTLARCM IGIWPHMEGE VLLDERPIAG WNRDELGPYL GYLPQDIELF
EGSIAENIAR FGEVDAEKVI AAARNAGLHD MILRFPKGYD TPIGEAGGLL SGGQRQRIGL
ARAIYGDPAL VVLDEPNANL DDVGEAALVR AVQTLKARGS TVVLVTHRPG ILAVADRLVI
LKNGSVQADG PRDAVLAALR NAQSPAAQAS LAVA
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