| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0566 |
|---|
| Symbol | |
|---|
| ID | 4674006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 596602 |
|---|
| End bp | 597951 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639837695 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_984892 |
|---|
| Protein GI | 121592996 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.76321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.105811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGGTA TAAAAAACCA GGGTACGGGA ACCCTGCGCG TGATGGAGCT GTTTGCGGGG
GTGGGCGGGT TTCGCCAAGG GCTTGAGCAA GTGCGCACAC CAGCGCAGCA GGCCGCTTTT
AAAGTGGTGT GGGCCAATCA GTATGAGCCC GCGAGCAAAA AACAGTGGGC GGCCGAGGTC
TACCGCGCGC GCTGGGGAGT GCAGGACTTG GTCAACGAGG ACATCTTTGA AGTGCTGCAG
GAGCCGGCGC TGATGGCGAG CCTTGATGCA CTGTGCCCGG ATGTGTTGGT CGGGGGCTTT
CCATGCCAAG ACTACTCCGT GGCGAAGCCG CTGAGCCATT CGCAGGGGCT TCAAGGGGAC
AAGGGGGTGA TGTGGTGGGC GGTCAGCCGG ATGCTGCAAG CGCGCCGCGC AGCGGGCGCA
CCGCTGAAGT ACCTGGTGCT GGAGAACGTG GACCGGTTGC TCTCTTCGCC GGCCACGTGT
CCAGGGCAAG ACTTTGCCCG GATTCTGGTC TCCCTGCAGC AAGAAGGCTA TGCGGTCGAG
TGGCGGGTGG TCAATGCAGC GGACTACGGG TTTGCACAAA AGCGCCGCAG GTTGTTCATG
GTGGCCGCGC ATGAGAGCAC GCCGCTGTAT ACCCGGATGG CGGCATGTGC GGGAGAGGCC
CAGCAGGGCA GCTTGCCGTG GTTGCTCAGC GCGGGGGTGC TGTCCAAGGC TTTGCCCGCA
AGTGTCAAAG ACGGGGGCAA GCTGCAGGTG TTTTCTTTGC CTGTTGGAGA TTTTGCGGCG
ATGTCGTATG TGCCGCTCAA GCGCGGCAGC GGCTTTGCCT CGGGCGGGGT GTGTGCGGCA
GGTTGGGTGT GCACAGCACC CCTGGTGGCC CAGAAACTGA CGGATTTCAC GGAGTTCACC
GGCTTGGCAC AGGCCCTGAC ACTGGGCGAT GTCGTGCGCG AGACGGGCGA GGCGGTGGCG
CCGGCATGTT TTTTGGCGGA TGCCGCGTTG CCCAAGTGGC AGCGGCTCAA GGCAGCCAAG
TCGATTGCGC GTGTCAGTGC GCATGGCCAT GCTTACCATT TCAGCGAGGG CGCGATGGCG
TTTCCGGACC GGTTGGACGC GCCGGCACGC ACCGTCATCA CGAGCGAAGG TGGCGCTGGT
GCGTCGCGCA CGACGCACGT GGTGCGGCAT GCGGATGGGC GGCTTCGGCG CCTGGTGCCC
GAGGAGCTGG AAGTGCTCAA CGGGTTTGCC CGGGGCTTCA CGGACATTGC CGGCATCACG
CCCGCAAAGC GAGGGTTTTT GATGGGCAAT GCGTTGGTGA CGGGGCTGGT GACGGCCATT
GGCCGGGCGC TGTGGCAGGC ACAGACCTGA
|
|---|
| Protein sequence | MLGIKNQGTG TLRVMELFAG VGGFRQGLEQ VRTPAQQAAF KVVWANQYEP ASKKQWAAEV
YRARWGVQDL VNEDIFEVLQ EPALMASLDA LCPDVLVGGF PCQDYSVAKP LSHSQGLQGD
KGVMWWAVSR MLQARRAAGA PLKYLVLENV DRLLSSPATC PGQDFARILV SLQQEGYAVE
WRVVNAADYG FAQKRRRLFM VAAHESTPLY TRMAACAGEA QQGSLPWLLS AGVLSKALPA
SVKDGGKLQV FSLPVGDFAA MSYVPLKRGS GFASGGVCAA GWVCTAPLVA QKLTDFTEFT
GLAQALTLGD VVRETGEAVA PACFLADAAL PKWQRLKAAK SIARVSAHGH AYHFSEGAMA
FPDRLDAPAR TVITSEGGAG ASRTTHVVRH ADGRLRRLVP EELEVLNGFA RGFTDIAGIT
PAKRGFLMGN ALVTGLVTAI GRALWQAQT
|
|---|
| |