| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0564 |
|---|
| Symbol | |
|---|
| ID | 4673999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 595154 |
|---|
| End bp | 595924 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639837693 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_984890 |
|---|
| Protein GI | 121592994 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0850175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACA CCCCTGGCCA CGACCCCCTG GTGCACACGC ACCTCTCGAG CTACCTGCAG
CGCATTTGCG ACCATGTGCG CCTGGGATAC CGCCACTGGT GCAGCGGCAC GATCCGCGTG
GACAAAGCGG CGGCGCTGGT GCGCAAATTC GACCGCCTGT ACGCCGTGGG TCGCTCGCGC
CACCAGCGCG CATGGGCACG TCACAAGGGT GAGGCCGCTG CCGTGCTGCT GCTATATGCG
CCCACGGTGC CAGGTACCGC CGACACCGCC GAAGCCGATG ACGACGCCCT GCTGTGGACG
CTGCTGCTCA CCCCTGGCCA GAGCCTGGCC CAGCAGCTGG AAGTGCTGCA CGACGCAGGC
ACGGCCACCG GGCGCGTGCA GGTGCGGGAC TTTGAGCTCG TGCAGTTGCC CCGCGCAGGC
CAGGCCCACA GCGCCTGGAC CTGGCGCCTG AGCGAAGGGG CTTACCAAGG CTGGCGCGCC
CATCTGATTG ACACCGCCCG GCGCAGCCCC TGGCTGCTGC CAGGGCAGGT GCAGCGCCTT
GCGCGCACCC CCGGTTTTGC TGGCTGCCGT GTGCAGGTCA AGAAACTGCA GCAACTGGCG
CGCGCCGAAC ACCAGCGGCG CATGCCGGGC CAAGCCGTCC TGGCGCTGCC GCGCGTGCTG
TACGTGCAGC GCCTGGCCAG CGGCCAGCTG CGACTGTCGC AGCTGCGCCG TCGCTATACA
GCGCAGACCT CGTGTGCTGC CAACACAAGG GGTGACAGAA CCTGCCACTG A
|
|---|
| Protein sequence | MSHTPGHDPL VHTHLSSYLQ RICDHVRLGY RHWCSGTIRV DKAAALVRKF DRLYAVGRSR
HQRAWARHKG EAAAVLLLYA PTVPGTADTA EADDDALLWT LLLTPGQSLA QQLEVLHDAG
TATGRVQVRD FELVQLPRAG QAHSAWTWRL SEGAYQGWRA HLIDTARRSP WLLPGQVQRL
ARTPGFAGCR VQVKKLQQLA RAEHQRRMPG QAVLALPRVL YVQRLASGQL RLSQLRRRYT
AQTSCAANTR GDRTCH
|
|---|
| |