Gene Ajs_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0562 
Symbol 
ID4673988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp593581 
End bp594693 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID639837691 
Producthypothetical protein 
Protein accessionYP_984888 
Protein GI121592992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0862774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CCCGCTGCGC CCTCGTTTCC CTGGCCGATA CGCCCTGGTA CCACGTTGTC 
AACCGCTGCG TGCGCCGCGC CTTCCTGTGC GGGCACGACG CGCACTCCGG TCAGGACTTT
GAACACCGCC GTGGCTGGGT GGAAACGCGC ATCCGTGAAT TGGCCTCGGT CTTTGCCATC
GACGTGGCAG CCTACGCCGT CATGAGCAAC CACTACCACG TCGTGCTGCG CGTGGATGCA
GCACGTGCCC GCGGCTGGAG CGATGAAGAG GTGCTGCGCC GCTGGACGCA GCTCTTCACC
GGCCCCTTGC TGGTGCAGCA GTTCCTGCAG CCGCCGCAGC GCGCCCTGAT GGGCCAGGCG
CAACTCGAGC AGGTGCAAGC ACTGGCGGAC ACCTACCGCG CCCGTCTGTT TGAACTGTCG
TGGTTCATGC GCGTGCTCAA CGAGTCGATT GCGCGCCAGG CCAATGCCGA AGACGGCGTG
AAAGGCCGCT TTTGGGAGGG GCGCTTCAAG AGCCAGGCGC TGCTGGACGA GCAGGCCCTG
CTGTCGGCCA TGACCTATGT GGACTTGAAC CCGGTGCGCG CCGGCATGGC CGAGAGCCTG
GAGGACAGCG CCCACACGGC CATCGCCGCC CGCCTGGCCG AGCTGCGGGG CCAGCCCTTT
GTGCCGGTGC AGGCGCCGCA GGCGCCTCTG CAGGCTGCGC AGCACAGCAG CGCGCCTGGC
GCCGCTGCGC CTCTGCCCCA CTTGCTGCCC GAGCAGGCCC TGGCCTGCCT GCCCGAGGCA
CCGCTGATGC CGTTCGACCC TACCGGCAGG TTTGCCCAGG CAGTACCGTT CGGGCTGCAG
GAATACCTGG ACTTGGTGGA CACCGTGGGC CGCGTGGTTC ACCCCACAAA GCGTGGCACC
ATTGCCCACC ATGTGCCGCC CTTGCTGCAG CGCCTGGGCA TGGACACCGA GGCGTTCATT
GCCTGCGCCG ATACCTTTTT TCGCTCCTTT GCCAACGCGG TGGGCACGCC GGCCAGTTTG
GCTCAACTGG CTGCCCGGCG CCAGGCACGC GCCCTGCGCG GCATGGCCAC CGCCCGCCAA
ATGCTGTCCC CCAGACCAGA ACGCGTGGCT TGA
 
Protein sequence
MTRPRCALVS LADTPWYHVV NRCVRRAFLC GHDAHSGQDF EHRRGWVETR IRELASVFAI 
DVAAYAVMSN HYHVVLRVDA ARARGWSDEE VLRRWTQLFT GPLLVQQFLQ PPQRALMGQA
QLEQVQALAD TYRARLFELS WFMRVLNESI ARQANAEDGV KGRFWEGRFK SQALLDEQAL
LSAMTYVDLN PVRAGMAESL EDSAHTAIAA RLAELRGQPF VPVQAPQAPL QAAQHSSAPG
AAAPLPHLLP EQALACLPEA PLMPFDPTGR FAQAVPFGLQ EYLDLVDTVG RVVHPTKRGT
IAHHVPPLLQ RLGMDTEAFI ACADTFFRSF ANAVGTPASL AQLAARRQAR ALRGMATARQ
MLSPRPERVA