Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0562 |
Symbol | |
ID | 4673988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 593581 |
End bp | 594693 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837691 |
Product | hypothetical protein |
Protein accession | YP_984888 |
Protein GI | 121592992 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0862774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGCC CCCGCTGCGC CCTCGTTTCC CTGGCCGATA CGCCCTGGTA CCACGTTGTC AACCGCTGCG TGCGCCGCGC CTTCCTGTGC GGGCACGACG CGCACTCCGG TCAGGACTTT GAACACCGCC GTGGCTGGGT GGAAACGCGC ATCCGTGAAT TGGCCTCGGT CTTTGCCATC GACGTGGCAG CCTACGCCGT CATGAGCAAC CACTACCACG TCGTGCTGCG CGTGGATGCA GCACGTGCCC GCGGCTGGAG CGATGAAGAG GTGCTGCGCC GCTGGACGCA GCTCTTCACC GGCCCCTTGC TGGTGCAGCA GTTCCTGCAG CCGCCGCAGC GCGCCCTGAT GGGCCAGGCG CAACTCGAGC AGGTGCAAGC ACTGGCGGAC ACCTACCGCG CCCGTCTGTT TGAACTGTCG TGGTTCATGC GCGTGCTCAA CGAGTCGATT GCGCGCCAGG CCAATGCCGA AGACGGCGTG AAAGGCCGCT TTTGGGAGGG GCGCTTCAAG AGCCAGGCGC TGCTGGACGA GCAGGCCCTG CTGTCGGCCA TGACCTATGT GGACTTGAAC CCGGTGCGCG CCGGCATGGC CGAGAGCCTG GAGGACAGCG CCCACACGGC CATCGCCGCC CGCCTGGCCG AGCTGCGGGG CCAGCCCTTT GTGCCGGTGC AGGCGCCGCA GGCGCCTCTG CAGGCTGCGC AGCACAGCAG CGCGCCTGGC GCCGCTGCGC CTCTGCCCCA CTTGCTGCCC GAGCAGGCCC TGGCCTGCCT GCCCGAGGCA CCGCTGATGC CGTTCGACCC TACCGGCAGG TTTGCCCAGG CAGTACCGTT CGGGCTGCAG GAATACCTGG ACTTGGTGGA CACCGTGGGC CGCGTGGTTC ACCCCACAAA GCGTGGCACC ATTGCCCACC ATGTGCCGCC CTTGCTGCAG CGCCTGGGCA TGGACACCGA GGCGTTCATT GCCTGCGCCG ATACCTTTTT TCGCTCCTTT GCCAACGCGG TGGGCACGCC GGCCAGTTTG GCTCAACTGG CTGCCCGGCG CCAGGCACGC GCCCTGCGCG GCATGGCCAC CGCCCGCCAA ATGCTGTCCC CCAGACCAGA ACGCGTGGCT TGA
|
Protein sequence | MTRPRCALVS LADTPWYHVV NRCVRRAFLC GHDAHSGQDF EHRRGWVETR IRELASVFAI DVAAYAVMSN HYHVVLRVDA ARARGWSDEE VLRRWTQLFT GPLLVQQFLQ PPQRALMGQA QLEQVQALAD TYRARLFELS WFMRVLNESI ARQANAEDGV KGRFWEGRFK SQALLDEQAL LSAMTYVDLN PVRAGMAESL EDSAHTAIAA RLAELRGQPF VPVQAPQAPL QAAQHSSAPG AAAPLPHLLP EQALACLPEA PLMPFDPTGR FAQAVPFGLQ EYLDLVDTVG RVVHPTKRGT IAHHVPPLLQ RLGMDTEAFI ACADTFFRSF ANAVGTPASL AQLAARRQAR ALRGMATARQ MLSPRPERVA
|
| |