| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0552 |
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| Symbol | |
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| ID | 4673258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 577232 |
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| End bp | 579193 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639837681 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_984878 |
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| Protein GI | 121592982 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCGCC GCAGCCTGCC TGCAGGGTGT GCCTGCATCG TTCTGAGTAC CGGCGTGACC
CTGGCGGCCC AGGCCGACGA ACTGGGCTAC GAGCTGTCGG AGCGGGACTA CCTGAGCGAG
ATACCGCACA TCTACTCCGC CTCGCGGCTG CCGCAGCAGC TGGAAGACGC CGCCGGCGCG
CTCACCGTGC TCGATCGCGA ATTCATCCGC CTGACGGGCG CGCGCGAGCT GACGGAAGTG
TTTCGCTGGG TGCCCGGCTT CCAGGTGGCC ACCTCGGCCG GGGGGCGCCC CGTGGTGGCC
TACCACGGGC TGTCGGGGCA GATATCGCAG CGCATGCAGG TCTATGTGGA CGGCCGCTCG
GTGTATGCCC CCTACCTGTT TGGCGGGGTC GACTGGAGCG CCCTGAGCGT GCCCCTCGAC
GAGATCGAGC GCATCGAAAT CCAGCGCGGC TCCAACTCCG TCACCTATGG CGCCAACGCC
TTTTTGGGGG TCATCCACAT CGTCACGCGC GCCGCCGCGC AGAGCGTGGG GGTGCGGGCC
GAGGTCGTGC AGGGCAGCGC CGGCGTGGCC GACCGGCACA TCCGCTGGGG GCATGCGCAG
CCCGCAGCGC AGTGGCGGAT TGCCGCCGGT CAGCGCTCGG ACGACGGCCT GGCCGGGCGT
CCCGACGGTT ACCGCACCAA CTACCTCGAC CTGCGCGCCG AATTCCAGCC CTCCAGTACC
CAGGAGTGGT CCATCACCTC CGGCATCACC CGCAGCCACC TGGGCTCGGG CTTCGAGAAG
CGGGTGGGCG ACCCCCCGCG CACGGAGATC GCGGAATCGG CCTCCCTCCA GGCGCGTTAC
CGGCAGACTG TCGACCCCGG GCAGGAGTGG AGCGTGACCA TGTCCTCGAC CCAGGACAGC
GGCGACGACA GCTTCGACAT CCCCTTGCTC GACAAAGGCT CCCTGCACAT CGACGGCCGT
CGCCGCGCCA ACCGCTATGC GCTGGATTAC CAGCATTTCA AGGACCTGTC GCCGCAATGG
CGAGCCTCGT GGGGGCTGGG CTACCGGCAA GACAGCGTCA CCGCGTTCCA GCTCTTCAAC
AGCGGCGCCC CCCAAACCAA CGCCTCATGG CTGGGCTTTC TCAATGCCGA ATGGAGACCC
TCCACGCACT GGACGCTGAA CTTCGGCAGC CTGGTCGAGC GCGACCGGTT GGCGCCCACC
CAATGGGCGC CGCGGCTGGC GATCAACTGG AAGCCGCTGG CCGCACACAC CTTCAAGCTC
GGCTACTCGT CTGCGTTTCG CACCCCCAGC ATTTTTGAGC AGCGCGCCGA CTGGCGCATC
CAGAACGAAG GAAACACGCT GGACATCCGT TACCTGTCCA GCGGAGGGCT GCTGCCAGAG
AGGGTGAACG CCTGGGATCT GGTGTATCTG GGCCAATGGC GCGAGCAGGG CCTGACGCTG
GATGCACGGC TGTTTCAGGA AAAACTCTCG CGCATCGTCA CCGGCAGGCT GACCCTGTTG
CCCATGGGCG CAACCTTTGC TCCCAATGCG GCGGCCTATG ACCTGCGCAA CAACGCCTCG
GCCATCAACC GCGGGGTGGA GTACCAGCTG AGCTGGCGCC CCGCCGGCGG CACCATCGTA
AGCTGGAACC AGTACTTTGC CCGGCCCCAG GCCTCGCCCG CGGTCATCGC GCAGACCATC
GCGCGGCGCA GCACCGGCCT GCTGGTCTCG CATGCCTGGC CCCGGGGCTG GACCACGGGG
CTGGGCTACA CCAGCATGAG CTCCATGCGC TGGCTGGGCG AGCCCACGCA GGTCGGCGCG
CAGCGATTTG CCTCGCTGCG CGTGGCGCGC TCCCTGCGCG TCAACGGCTC GCATGTGCAT
GTCGCCGTCC GCTGGTTCCA GCCGCTCGGG CAATCCGACG AATTCCGGGA GCTGCAGCGC
GAACGGCGCA AACTGTGGCT TGCCGTGAGC CTGGAATACT GA
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| Protein sequence | MSRRSLPAGC ACIVLSTGVT LAAQADELGY ELSERDYLSE IPHIYSASRL PQQLEDAAGA
LTVLDREFIR LTGARELTEV FRWVPGFQVA TSAGGRPVVA YHGLSGQISQ RMQVYVDGRS
VYAPYLFGGV DWSALSVPLD EIERIEIQRG SNSVTYGANA FLGVIHIVTR AAAQSVGVRA
EVVQGSAGVA DRHIRWGHAQ PAAQWRIAAG QRSDDGLAGR PDGYRTNYLD LRAEFQPSST
QEWSITSGIT RSHLGSGFEK RVGDPPRTEI AESASLQARY RQTVDPGQEW SVTMSSTQDS
GDDSFDIPLL DKGSLHIDGR RRANRYALDY QHFKDLSPQW RASWGLGYRQ DSVTAFQLFN
SGAPQTNASW LGFLNAEWRP STHWTLNFGS LVERDRLAPT QWAPRLAINW KPLAAHTFKL
GYSSAFRTPS IFEQRADWRI QNEGNTLDIR YLSSGGLLPE RVNAWDLVYL GQWREQGLTL
DARLFQEKLS RIVTGRLTLL PMGATFAPNA AAYDLRNNAS AINRGVEYQL SWRPAGGTIV
SWNQYFARPQ ASPAVIAQTI ARRSTGLLVS HAWPRGWTTG LGYTSMSSMR WLGEPTQVGA
QRFASLRVAR SLRVNGSHVH VAVRWFQPLG QSDEFRELQR ERRKLWLAVS LEY
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