Gene Ajs_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0549 
Symbol 
ID4673898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp574053 
End bp575018 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID639837678 
Productglycosyl transferase family protein 
Protein accessionYP_984875 
Protein GI121592979 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000233931 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.956589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA AATTGCGTCT TGCGGTATTG ATACCCTGCT TCAACGAAGA AGTGGCGATT 
GGGACGGTCG TGCGTGATTT CCAGCGGGTT CTGCCGCAGG CGACGATCTA CGTGTTCGAC
AACAATTCGC GTGACAACAC CGTGGCCATC GCGCGCAGTC TGGGCGCCGT GGTGCGCCAT
GTACCCCTGC AAGGCAAGGG AAACGTCATG CGACGCATGT TTGCCGACGT CGAGGCCGAC
ATCTACGTCC TGGTCGATGG CGATGCCACG TACCACGCCG AAAGCAGCCC GCAAATGATT
GACCTGCTGC TGGCCGAGGG CCTGGACATG GTCGTCGGGC GCCGCGAAAG CATCGAAGAG
TACAGCTACC GCCTGGGACA CCGCTTGGGC AATCGCATGC TGACGGGCTT CGTAGCCCGT
CTGTTCGGGC GGCGCTTCAC CGACATGCTG TCGGGCTACC GGGTGTTTTC CCGCCGCTAC
GTGAAATCCT TCCCCGCCCT GGCGCGGGGT TTCGAGACCG AGACCGAGCT GACGGTGCAT
GCACTCGAGC TGCGCATGCC GGTGGCGGAA GTCGATACTC CGTACAAGGC GCGGCCAGAA
GGCTCCTTCA GCAAGCTCAA CACCATCCGC GATGGCTTGC GCATTCTGAA CACCATCGTG
CGCTTGTTCC GGCTCGAACG CCCCCTGCTG TTTTTCAGCC TGATCAGCGC ATTGCTCGCC
CTGCTGGCCG TGGCGTTGGC CGTGCCGCTG GCCGTGACCT ATGTCGAAAC TGGCTTGGTG
CCACGGCTGC CCACCGCCGT GCTGGCCTCC GGCCTGGGGC TCCTGTCCAG CCTGTCCCTG
ACCTGCGGCC TCATCCTTGA GAACGTCACC CACACCCGGC AGGAAGCACG CCGGCTGATT
TATCTCGGCA TTCCGTGCAG CGGCCTGCCC GGCACGGTAG GCGCGTCAGT CGGGAGCCAG
GATTGA
 
Protein sequence
MNNKLRLAVL IPCFNEEVAI GTVVRDFQRV LPQATIYVFD NNSRDNTVAI ARSLGAVVRH 
VPLQGKGNVM RRMFADVEAD IYVLVDGDAT YHAESSPQMI DLLLAEGLDM VVGRRESIEE
YSYRLGHRLG NRMLTGFVAR LFGRRFTDML SGYRVFSRRY VKSFPALARG FETETELTVH
ALELRMPVAE VDTPYKARPE GSFSKLNTIR DGLRILNTIV RLFRLERPLL FFSLISALLA
LLAVALAVPL AVTYVETGLV PRLPTAVLAS GLGLLSSLSL TCGLILENVT HTRQEARRLI
YLGIPCSGLP GTVGASVGSQ D