| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0548 |
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| Symbol | |
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| ID | 4673867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 572939 |
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| End bp | 574018 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639837677 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_984874 |
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| Protein GI | 121592978 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00428221 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.756341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCACC CTGGACGCCC CGCCACGAAG CTGCAGATCA CCGATGCCGA GCGCGCAGAG
CTGCATGCGC GACTGCGCGT ACGCAAAGCG CCCGAGGACG AGAAGCTGCG CATGCGAATC
GTGCTGGGCT GCGCAGATGG GGAGTCGGGC ACCATGATTG CCCAACGCTT GGGCACGACG
GTGCAAACTG TCTCCAAGTG GCGGCGGCGC TACCGGGCGT ATCGTCTGGC GGGTTTGACC
GATGCCCCGC GCGCTGGCCG CCCGCGCAGT GTGGGCGACG AGCAGGTTCA GCTCATTGTG
GACAAGGTTC GCCAGAGCAA GCCTGACAAC GCCACGCACT GGAGCGTGCG CCAGATGAGT
CGGCACGCTG GCGTATCGCC CGCGACGGTG CAGCGCATCT GGCATGCCTT TGGGCTGAAG
CCGCACCTGC AAGAAACCTT CAAGCTATCG ACGGATCCCC ATTTCGTGGA CAAGGTACGG
GATGTGGTGG GGCTGTATAT GGCACCACCC GATCGCGCCT TGGTGCTGTG CGTGGACGAG
AAGAGCCAGA TCCAGGCTCT GGATCGCACC CAACCAGGGT TACCACTGAC GTTTGGCAAA
CCCAGCACGC GCACGCACGA TTACAAGCGC CATGGCACAA CGTCGCTGTT TGCAGCGCTG
GATGTGGCCA CTGGCAAAGT CATAGGACAG CTCAAGCGCC GTCACCGCAG TGTGGAATTC
CTGCAGTTCC TCAAAGCCAT CGATGCAGCG GTGCCTGGCG AACAAGACAT CCACCTGATC
ATGGACAACT ACGGCACGCA CAAGACGCAG GCAGTGCGGG CCTGGCTAGC AGCCCATCCT
CGCTACCACG TTCACTTCAC GCCCACCTCA GCGTCCTGGC TCAATCTGGT CGAGCGTTTC
TTTAGCCAGA TCAGCGAGCA GTGGATCAAG CGCAGCGCCC ACACCAGCGT TGCTCAGCTG
GAGCAATCCA TACGGGAATA CATTGATCGT CACAACGAGG ATCCCAAGCC GTTCGTGTGG
CATAAAAGTG CGGACACCAT CTTGGCATCT GTGGCGCGGG CAGCGAGTAC CATTATTTGA
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| Protein sequence | MAHPGRPATK LQITDAERAE LHARLRVRKA PEDEKLRMRI VLGCADGESG TMIAQRLGTT
VQTVSKWRRR YRAYRLAGLT DAPRAGRPRS VGDEQVQLIV DKVRQSKPDN ATHWSVRQMS
RHAGVSPATV QRIWHAFGLK PHLQETFKLS TDPHFVDKVR DVVGLYMAPP DRALVLCVDE
KSQIQALDRT QPGLPLTFGK PSTRTHDYKR HGTTSLFAAL DVATGKVIGQ LKRRHRSVEF
LQFLKAIDAA VPGEQDIHLI MDNYGTHKTQ AVRAWLAAHP RYHVHFTPTS ASWLNLVERF
FSQISEQWIK RSAHTSVAQL EQSIREYIDR HNEDPKPFVW HKSADTILAS VARAASTII
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