Gene Ajs_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0546 
Symbol 
ID4673874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp570724 
End bp571374 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID639837675 
Producthypothetical protein 
Protein accessionYP_984872 
Protein GI121592976 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.882481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC TCATCCTCTT CGGTGCCGGA GGCCACGCGC GCGAAGTGGC GCAGCTGGTG 
CGCGACATCA ACCAGGCCCA GCCCGGCAGC TGGCAGCTGC TCGGTTTCAT GGCCGACCCC
GGCGCCGCCC CCGGGAATCC CATGCCCCTG CCTGCCCCCT GGCTGGGGGA CAGCCAGCAG
GCGCTGGCCG CCCACCCGGG CGCCCACTGC ATCGTCGCCG TAGGCGATTC CCGGGCTCGC
CGCAGGATCG CAGCCCAATT GCGGCAGCAG CACCCCGGGC TGCGCTTTGC CACCTTGGTC
CACCCGCGGG CCTGGCTGGC GGAAGGGGTT CACCTGGGGC CCGGCAGTGT GGTGTTTGCC
GGCGCCTGCA TCAATGTCGA TGTCACCATT GGACGCCATG CCAGCATCAA CCTGGCCTGC
ACCATCAGTC ACGACTGCGT GCTGGGCGAA TACGTCAGCC TCGGCCCCGG CGTGCATCTG
CCGGGGGGGG TGACGCTGGG CGAGGCGGTC GATGTCGGCA CCGGGGCCTG CTTTCGGCCC
CGCGTCAGCG TGGGGGCCAA CGCGGTCATC GGCGCCGGCG CCGCCGTGGT GCATGATTTG
CCTGGCAATT GCGTGGCGGT GGGGGCGCCT GCACGCCCGA CCAGACCTTA A
 
Protein sequence
MTPLILFGAG GHAREVAQLV RDINQAQPGS WQLLGFMADP GAAPGNPMPL PAPWLGDSQQ 
ALAAHPGAHC IVAVGDSRAR RRIAAQLRQQ HPGLRFATLV HPRAWLAEGV HLGPGSVVFA
GACINVDVTI GRHASINLAC TISHDCVLGE YVSLGPGVHL PGGVTLGEAV DVGTGACFRP
RVSVGANAVI GAGAAVVHDL PGNCVAVGAP ARPTRP