| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0544 |
|---|
| Symbol | |
|---|
| ID | 4673864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 567445 |
|---|
| End bp | 568287 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639837673 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_984870 |
|---|
| Protein GI | 121592974 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.466883 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACTC ATTCCAGCAG CATTGGGCTG CGACCGTCGA GCAGCCCGCT GCAGTTACTG
CGCAGCCTCT GGCATCACCG TTTTTTGCTC CGCCAACTGG TGCGGCGAGA TGTCGCCAGC
CGGTACCGAG GCTCCCTGAT GGGCCTGCTC TGGTCCTTGC TGCTGCCCTG CGTGATGTTG
GCGGTCTATG TATTCGTTTT CGGCTATGTT TTCACGCCGG TGCGCAAGGT GGGTGACGGG
GCGCTGAGCC CCGCGTTTGC GCTGTCCCTG TTTGCCGGGA TGCTGTTGCA CGGCATGCTG
GGCGAATGCC TGTCGCGTGC GCCTGCGGCC GTGCTGGCCC AGCCCAGCTA TGTCAAGAAG
GTCGTGTTCC CAATGGAACT GCTGCCGCTG GCCGTGGTGG GTACGGCGGT CGTGCAGTTC
CTCATTGGCT CGGCCGTGCT GCTGCTGGCC CTGGTGCTCA CCCAGGGCTT GCCGGCGACC
GCCTGGTTAT GGCCGCTGGC ATGGCTGCCG CTGGTGGCGC TGGTGGCGGG TATTGCCCTC
ATGCTTGCGG CCCTCACGGT GTATTTGCGC GACCTGGCCC AACTCACCGG ATTCGTCGCG
ACATTGCTGT TGTTTCTCTC CCCGGTCTTC TACCCGTTGG AGAGCCTGCC GCCCAACTGG
CAGCATTGGC TGCTGCTCAA TCCGCTCACG GTGCCCATCG AGGCAACCCG CAGCCTGCTG
GTCCATGGAC AGGGCTTGAA TTGGGCTCAC TGGAGTGCCC ATGCAGCGGG GTGTCTGGCC
ACGCTCTGGG CCGGCTGGTG GATTTTTCAG CGCGCGCGCA AGGGGTTTGC CGATGTCATC
TGA
|
|---|
| Protein sequence | MNTHSSSIGL RPSSSPLQLL RSLWHHRFLL RQLVRRDVAS RYRGSLMGLL WSLLLPCVML
AVYVFVFGYV FTPVRKVGDG ALSPAFALSL FAGMLLHGML GECLSRAPAA VLAQPSYVKK
VVFPMELLPL AVVGTAVVQF LIGSAVLLLA LVLTQGLPAT AWLWPLAWLP LVALVAGIAL
MLAALTVYLR DLAQLTGFVA TLLLFLSPVF YPLESLPPNW QHWLLLNPLT VPIEATRSLL
VHGQGLNWAH WSAHAAGCLA TLWAGWWIFQ RARKGFADVI
|
|---|
| |