| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0528 |
|---|
| Symbol | |
|---|
| ID | 4672967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 550671 |
|---|
| End bp | 552833 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639837657 |
|---|
| Product | glycine--tRNA ligase |
|---|
| Protein accession | YP_984854 |
|---|
| Protein GI | 121592958 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0942391 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACC AGAATCTTCT TGTCGAACTG TTTGTCGAAG AACTGCCCCC GAAGGCGTTG
CAAAAGCTCG GCGATGCCTT CGCGGGCGTG CTGCTGGAGC AACTGCAGGC GCAAGGCCTG
ACCTCGGCAC ATTCGCAGCT CACCGCCTTT GCCTCGCCGC GCCGGCTGGC GGCGCACATC
ACCGAAGTGC TGCCCGCCGC GGCCGACAAG GCGGTGTCGC AAAAGCTCAT GCCCGTGGCC
GTGGGTCTGG ATGCGAGCGG CCAGCCCACG CCGGCGCTGC TCAAGAAGCT GACCGCGCTG
GGCGCCGACG CCGCCAGCGT GCCGCAGCTC AAGCGCGTGC ACGACGGCAA GGCCGAGGTG
CTGTTCTTTG AAAGCATGGC CAAGGGCGCG CTGCTGGCCG ACGGCCTGCA GAAGGCGCTG
GACGAAGCCA TTGCCAAGCT GCCGATCCCG AAGGTGATGC GCTACCAGTT GCAGGACGGT
TGGACCAGCG TGCATTTCGT GCGCCCGGCG CACGGCCTGG TGGCGCTGCA CGGCACGCAG
GTGCTGGTGG GCGTGCAGGC CCTGGGCCTG ACGGCCGGCA ACACCACGCA CGGCCACCGC
TTCGAGGCCT CCGTGGACCC GGTCGTGATC CAGAGCGCCG ACAGCTACGC CGAGCAACTG
CGCAGCGAAG GCGCGGTGAT TGCTAGCTTT GCCGAGCGCC GCGCCGAGAT CGCGCGCCAG
CTGCAGGCGG CCGCCGACCG TGTAGGCGGT GGCGTGCGGC CGATCGAAGA CGCCGCTCTG
CTGGACGAAG TGACGGCGCT GGTCGAGCGC CCCAATGTGC TGGTCTGCGA ATTCGAGAAG
GAGTTCCTCG CCGTGCCGCA GGAGTGCCTG ATCCTCACCA TGAAGGCCAA CCAGAAGTAC
TTCCCGCTGC TGGATGCCGA GGGCAAGCTC ACCCACCAGT TCCTGGTGGT GAGCAACATC
AGCCCGCAGG ACGCCAGCGC CGTCATCCAG GGCAACGAGC GCGTGGTGCG CCCGCGCCTG
GCGGACGCCA AGTTCTTCTT CGATCAGGAC CGCAAGAAGA CCCTGGTCAG CCGCGTGGAC
CAGCTGGCCA AGGTGGTCTA CCACAACAAG CTGGGCACGC AGGGCGAACG TGTGGAGCGC
GTGCGCCATA TCGCCAAGGC CATCGCCACG CAGCTGTTCA CGGCGCTTGC GCAGGGTAAC
GCGGCGCTGG ATTCCCAGGA AGGCGAGATC GCGCAGGACT ATCTACTGAC CTGCGTGGAC
AACGCCGCGC TGCTGGCCAA GACCGACCTG GTCACCGACA TGGTGGGCGA GTTCCCCGAG
CTGCAGGGCA TCATGGGCGG CTACTACGCG GTGAGCGACG GCCTGCCCGA CGAGGTGGCG
CACGCCATCG AGGACCATTA CAAGCCCCGC TTTGCCGGCG ACGCGCTGCC GCGCGAGAAC
GTGGGCGTGG TCGTCGCGCT GGCCGACAAG CTGGAGACGC TGGTGGGCAT GTTCGGCATC
GGCAACCTGC CCACGGGCGA CCGCGACCCG TTTGCGCTGC GTCGCCATGC GCTGGGCGTG
ATCCGCATGC TGGTCGAGAA AGAGTTGCCG CTGGATCTGG ATGCGCTGCT GGCCAGCGCG
GTGCCGGCTT TCGGCGACAA GATCGAGGAC ACCAGCGCCC AGTTGGCCGA CTTCATCTAC
GACCGCCTGG CTGGCTCCCT GCGCGAGCAG GGATACAGCG CGCAGGAGGT GGACGCCGTC
ATCGCCCTGC GCCCGCAGCG CCTGGCCCTG GTGCCCCGCC AGTTGGAGGC CGTGCGTGCC
TTCACCCAAC TGGAAGAAGC GCCCGCGCTG GCCGCGGCCA ACAAGCGCGT GACCAACATC
CTCAAGAAGG CCGGCGAGGT GGATCCGCAC GTGAATGAAG AACTGCTGCA GGAGCCCGCC
GAGAAGGACC TGTACGCCGC GCTGCAGCGC TTCGTGCCCG AGGCCAACGC CCAGTTCGAC
AGTGGCGACT ACACCGCCAG CCTGCAAACC CTGGCCGTGC TGCGCGCGCC CGTGGACGCG
TTCTTCGACG ACGTGATGGT CAATGCCGAG GAGCTGGCGT TGCGCCTGAA CCGCCAGGGC
CTGCTCAAGA AGCTGCACAT GGCGATGAAC CGCGTGGCCG ACCTCTCGCG CCTGGCGGTG
TGA
|
|---|
| Protein sequence | MNHQNLLVEL FVEELPPKAL QKLGDAFAGV LLEQLQAQGL TSAHSQLTAF ASPRRLAAHI
TEVLPAAADK AVSQKLMPVA VGLDASGQPT PALLKKLTAL GADAASVPQL KRVHDGKAEV
LFFESMAKGA LLADGLQKAL DEAIAKLPIP KVMRYQLQDG WTSVHFVRPA HGLVALHGTQ
VLVGVQALGL TAGNTTHGHR FEASVDPVVI QSADSYAEQL RSEGAVIASF AERRAEIARQ
LQAAADRVGG GVRPIEDAAL LDEVTALVER PNVLVCEFEK EFLAVPQECL ILTMKANQKY
FPLLDAEGKL THQFLVVSNI SPQDASAVIQ GNERVVRPRL ADAKFFFDQD RKKTLVSRVD
QLAKVVYHNK LGTQGERVER VRHIAKAIAT QLFTALAQGN AALDSQEGEI AQDYLLTCVD
NAALLAKTDL VTDMVGEFPE LQGIMGGYYA VSDGLPDEVA HAIEDHYKPR FAGDALPREN
VGVVVALADK LETLVGMFGI GNLPTGDRDP FALRRHALGV IRMLVEKELP LDLDALLASA
VPAFGDKIED TSAQLADFIY DRLAGSLREQ GYSAQEVDAV IALRPQRLAL VPRQLEAVRA
FTQLEEAPAL AAANKRVTNI LKKAGEVDPH VNEELLQEPA EKDLYAALQR FVPEANAQFD
SGDYTASLQT LAVLRAPVDA FFDDVMVNAE ELALRLNRQG LLKKLHMAMN RVADLSRLAV
|
|---|
| |