Gene Ajs_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0526 
Symbol 
ID4672908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp548357 
End bp549580 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID639837655 
Productbeta-ketoacyl synthase 
Protein accessionYP_984852 
Protein GI121592956 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.38393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0451543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA AACGGGTGGT GATCACGGGC GCGGGCATCG TCTCGTGCAT TGGCAACGAT 
CTGCAGACCG TGGAGGAGGC GCTGCGCGCC AGCCGCTCCG GCATCAAGGC CGTGCCCCAG
TTCACCGAGC TGGGCCTGCG CAGCCAGGTG GCGGGCGTGC CTGAGATCGA CGTCGAGGCG
CGCATCGACC GCAAGCAGCT GCGCTTCATG GGCGACGCCG CGGCCTATGC GCAGATTGCC
CTGGAAGACG CCATCCAGCA GGCCGGCCTC ACCCCCGAAC AGGTCAGCCA CCCGCGCACC
GGCCTCATCA TGGGCTCGGG CGGCGGCTCT CCCGCCAACC AGATCGAGGC GGCCGACACG
CTGCGCGAAA AGGGCATCCG CCGCGTAGGA CCCTACCAGG TCACGCGCTG CATGAGCTCC
ACCGTCTCGG CGTGCCTCGC GACCAACTTC AAGGTCAAGG GCATCAACTA TTCCATTACC
TCGGCCTGCT CCACGTCGGC GCACTGCATC GGCGCCGCTG CGCAGCAGAT CGCCTGGGGC
CTGCAGGACG TGATGTTCGC CGGCGGCGGC GAAGAGCTGT CCTGGGGCAT GTCGCTGCTG
TTCGACGGCA TGGGCGCCAT GTCCAGCAAG TACAACGCCA CGCCCGAGAA GGCCTCGCGC
GCCTATGACG CCAACCGCGA CGGCTTCGTG ATCGCCGGCG GCGGCGGTGC CGTGGTGCTG
GAAAGCCTGG AGCATGCACT GGCACGCGGC GCCACCATCC TGGGTGAGGT CGTGGGCTTT
GGCGCCACGA GCGACGGCGA AGATATGGTG GCCCCGTCGG GCGACGGCGC CATCGCCTGC
ATGCAGCAGG CCATGGAAGG ACTGGGCGCG CCCATCGACT ACATCAACAC CCACGGCACC
TCCACGCCTG TGGGCGACAT GCAGGAAGTG CGTGCCATGC AGGCGGTGTT CGGCGAGGCC
GTGCCGCCGT TCTCCAGCAC CAAGTCGCTC ACCGGCCATT CGCTGGGCGC CACCGGCGTG
CAGGAAGCGA TCTACTGCCT GATCATGCTG AACAAGGGCT TCATCGCCGG TTCGGCCAAC
GTGGAGACGC CGGACCCGCT GCTGGGCTCC ATGCCGCTGG TGACCCAGAC GCGCGACGCG
CAGTTGACCC ACGTGCTGTC CAACAGCTTC GGCTTTGGCG GCACCAACGC CAGCCTGGTG
CTGCGCCGCT GGCAAGGCCA GTGA
 
Protein sequence
MTKKRVVITG AGIVSCIGND LQTVEEALRA SRSGIKAVPQ FTELGLRSQV AGVPEIDVEA 
RIDRKQLRFM GDAAAYAQIA LEDAIQQAGL TPEQVSHPRT GLIMGSGGGS PANQIEAADT
LREKGIRRVG PYQVTRCMSS TVSACLATNF KVKGINYSIT SACSTSAHCI GAAAQQIAWG
LQDVMFAGGG EELSWGMSLL FDGMGAMSSK YNATPEKASR AYDANRDGFV IAGGGGAVVL
ESLEHALARG ATILGEVVGF GATSDGEDMV APSGDGAIAC MQQAMEGLGA PIDYINTHGT
STPVGDMQEV RAMQAVFGEA VPPFSSTKSL TGHSLGATGV QEAIYCLIML NKGFIAGSAN
VETPDPLLGS MPLVTQTRDA QLTHVLSNSF GFGGTNASLV LRRWQGQ