Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0526 |
Symbol | |
ID | 4672908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 548357 |
End bp | 549580 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837655 |
Product | beta-ketoacyl synthase |
Protein accession | YP_984852 |
Protein GI | 121592956 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.38393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0451543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA AACGGGTGGT GATCACGGGC GCGGGCATCG TCTCGTGCAT TGGCAACGAT CTGCAGACCG TGGAGGAGGC GCTGCGCGCC AGCCGCTCCG GCATCAAGGC CGTGCCCCAG TTCACCGAGC TGGGCCTGCG CAGCCAGGTG GCGGGCGTGC CTGAGATCGA CGTCGAGGCG CGCATCGACC GCAAGCAGCT GCGCTTCATG GGCGACGCCG CGGCCTATGC GCAGATTGCC CTGGAAGACG CCATCCAGCA GGCCGGCCTC ACCCCCGAAC AGGTCAGCCA CCCGCGCACC GGCCTCATCA TGGGCTCGGG CGGCGGCTCT CCCGCCAACC AGATCGAGGC GGCCGACACG CTGCGCGAAA AGGGCATCCG CCGCGTAGGA CCCTACCAGG TCACGCGCTG CATGAGCTCC ACCGTCTCGG CGTGCCTCGC GACCAACTTC AAGGTCAAGG GCATCAACTA TTCCATTACC TCGGCCTGCT CCACGTCGGC GCACTGCATC GGCGCCGCTG CGCAGCAGAT CGCCTGGGGC CTGCAGGACG TGATGTTCGC CGGCGGCGGC GAAGAGCTGT CCTGGGGCAT GTCGCTGCTG TTCGACGGCA TGGGCGCCAT GTCCAGCAAG TACAACGCCA CGCCCGAGAA GGCCTCGCGC GCCTATGACG CCAACCGCGA CGGCTTCGTG ATCGCCGGCG GCGGCGGTGC CGTGGTGCTG GAAAGCCTGG AGCATGCACT GGCACGCGGC GCCACCATCC TGGGTGAGGT CGTGGGCTTT GGCGCCACGA GCGACGGCGA AGATATGGTG GCCCCGTCGG GCGACGGCGC CATCGCCTGC ATGCAGCAGG CCATGGAAGG ACTGGGCGCG CCCATCGACT ACATCAACAC CCACGGCACC TCCACGCCTG TGGGCGACAT GCAGGAAGTG CGTGCCATGC AGGCGGTGTT CGGCGAGGCC GTGCCGCCGT TCTCCAGCAC CAAGTCGCTC ACCGGCCATT CGCTGGGCGC CACCGGCGTG CAGGAAGCGA TCTACTGCCT GATCATGCTG AACAAGGGCT TCATCGCCGG TTCGGCCAAC GTGGAGACGC CGGACCCGCT GCTGGGCTCC ATGCCGCTGG TGACCCAGAC GCGCGACGCG CAGTTGACCC ACGTGCTGTC CAACAGCTTC GGCTTTGGCG GCACCAACGC CAGCCTGGTG CTGCGCCGCT GGCAAGGCCA GTGA
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Protein sequence | MTKKRVVITG AGIVSCIGND LQTVEEALRA SRSGIKAVPQ FTELGLRSQV AGVPEIDVEA RIDRKQLRFM GDAAAYAQIA LEDAIQQAGL TPEQVSHPRT GLIMGSGGGS PANQIEAADT LREKGIRRVG PYQVTRCMSS TVSACLATNF KVKGINYSIT SACSTSAHCI GAAAQQIAWG LQDVMFAGGG EELSWGMSLL FDGMGAMSSK YNATPEKASR AYDANRDGFV IAGGGGAVVL ESLEHALARG ATILGEVVGF GATSDGEDMV APSGDGAIAC MQQAMEGLGA PIDYINTHGT STPVGDMQEV RAMQAVFGEA VPPFSSTKSL TGHSLGATGV QEAIYCLIML NKGFIAGSAN VETPDPLLGS MPLVTQTRDA QLTHVLSNSF GFGGTNASLV LRRWQGQ
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