| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0520 |
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| Symbol | |
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| ID | 4672780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 542387 |
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| End bp | 543505 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639837649 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_984846 |
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| Protein GI | 121592950 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.365808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0158629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG CCCTGCCCCT TCGCGCCACC CACGACGCCG ACGCCTGGGA GAACCCCATG
GGCCTGATGG GCTTCGAGTT CGTGGAGTTC ACCTCGCCCA CCCCGGGGCT GCTGGAAGCG
GTGTTCGAGA AGCTGGGCTT TACGCTCGTG GCGCGCCACC GGTCCAAGGA CGTGCTGCTG
TACCGGCAGA ACCAGATCAA CTTCATCCTG AACCGCGAGC CGGCCAGCCA GGCCGCGTAC
TTTGGCGCCG AACACGGCCC CTCGGCCTGC GGGCTGGCCT TTCGCGTGAA GGATTCGCAC
CAGGCCTACC GGCGTGCGCT GGAGCTGGGC GCCCAGCCGA TCGAGATCCC CACCGGCCCC
ATGGAACTGC GCCTGCCGGC CATCAAGGGC ATCGGCGGCG CGCCGCTGTA CCTGATCGAC
CGCTTCGAGG ACGGCAAGTC CATCTACGAC ATCGACTTCG ACTTCCTGCC CGGCGTGGAC
CGGCGCCCGG TGGGGCACGG CCTGAACGAG ATCGACCACC TCACGCACAA CGTGTACCGC
GGACGCATGG GATTCTGGGC CAATTTCTAC GAAAAGCTCT TCAACTTCCG AGAGATCCGC
TACTTCGACA TCCAGGGCGA GTACACGGGC CTGACGTCGA AGGCCATGAC GGCGCCGGAC
GGCAAGATCC GCATCCCGCT GAACGAAGAG GCCAAGCAGG GCGGCGGGCA GATCGAGGAA
TTCCTGATGC AGTTCAACGG CGAGGGCATC CAGCACATCG CGCTGATCTG CGACTCGCTC
GTCGAGGTGG TGGACAAGCT GGGGCTGGCG GGCGTGCCCC TGGCCCCGGC GCCCAACGAC
ATCTATTACG ACATGCTGGA CACCCGCCTG CCGAGTCACG GCCAGAACGT GGCGGAACTG
CAGGCGCGCG GCATCCTGCT GGACGGCACC ACGGCCGACG GCACACCCCG TCTGCTGCTG
CAGATCTTCT CCACGCCCAT GCTGGGGCCG GTGTTCTTTG AGTTCATCGA ACGCCAGGGC
AACTACCGCG AGGGTTTCGG CGAAGGCAAC TTCAAGGCGC TGTTCGAATC GCTGGAGCGT
GACCAGATCC GGCGCGGCGT CCTGCAGACC CAGGCGTGA
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| Protein sequence | MTAALPLRAT HDADAWENPM GLMGFEFVEF TSPTPGLLEA VFEKLGFTLV ARHRSKDVLL
YRQNQINFIL NREPASQAAY FGAEHGPSAC GLAFRVKDSH QAYRRALELG AQPIEIPTGP
MELRLPAIKG IGGAPLYLID RFEDGKSIYD IDFDFLPGVD RRPVGHGLNE IDHLTHNVYR
GRMGFWANFY EKLFNFREIR YFDIQGEYTG LTSKAMTAPD GKIRIPLNEE AKQGGGQIEE
FLMQFNGEGI QHIALICDSL VEVVDKLGLA GVPLAPAPND IYYDMLDTRL PSHGQNVAEL
QARGILLDGT TADGTPRLLL QIFSTPMLGP VFFEFIERQG NYREGFGEGN FKALFESLER
DQIRRGVLQT QA
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