Gene Ajs_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0516 
Symbol 
ID4673200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp537647 
End bp539332 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content67% 
IMG OID639837645 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_984842 
Protein GI121592946 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0152867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAA TCTGGCTCAA GAACTACCCC GCTGGCGTGC CGCACGACGT GGATGCCGAT 
GCCTACCCCT CGGTGGCGCA GATGCTGGAG GAGTCCTTCC ACCGCCACGC CGACAGCCCG
TTCTCGGTGT GCATGGACCG GTGGATGAGC TACCGCGAAC TCGACCGCCT GTCGGCCCGG
CTCGGCGCGT GGCTGCAGGG CCAGGGTCTC GCGCCCGGTG CGCGCGTGGC CATCATGCTG
CCCAACGTGC CGCAGTTCGC GGTGACCATG GCCGCCGTGC TGCGCGCGGG CTACACCTGC
GTGAACGTGA ACCCGCTGTA CACGGCGCGC GAGCTGGAGC ACCAGCTCAA GGACTCGGGC
GCCTCGGCCA TCGTCATCCT GGAGAACTTC GCGCACACGC TGGCCGAGGT GATCGACCAC
ACGGCCGTGC AGCATGTGGT GATCGCCTCC ATGGGCGACC TGCTGGGCGC CTGGTACGGA
CGCTGGATCA CCTTTGCCGT GCGCCACCTG GCCAAGATGG TGCCCGCGTA CGAGCTGCCC
CTGACGGGCG GGCGCCAAGT GATCAGTTTC AAGCGCGCGC TGGCCCTGGG CGAGCGGCGC
ACGCTGACCC CGGCGCGCGT CGCGCCCGAC ACTCCGGCCT TCCTGCAGTA CACGGGCGGC
ACCACGGGCC TGTCCAAAGG CGCAGTGCTC ACCCAGCGCA ACATCGTCGC CGCGACGCTG
CAGGCCGAGG CCTGGTTCAC CCCCGCGCTG GGCAAGATCG GCGACCTGAG CCGCGCCAAC
AGCATTGCCG CGCTGCCGCT GTACCACATC TTCGCGCTCA CGCTGTGCCT GCTGGCCATC
CGCCAGGGCT CGCGCCTGAC GCTGATCCCG AACCCGCGGG ACATCCCCAA GTTCGTGGAG
GTGCTGAAGA AGCGCCCCTT CCACATGCTG CCCGCCGTGA ACACGCTGTT CAACGCACTG
CTGCAGAACC CGCAGTTCCG CCATCTGGAT TTCTCGCAGC TGTGCGTGGC GCAGGCCGGC
GGCATGGCCG CGACCGAGGC CACGGCCCAG CAGTGGAAGG CCGTGACGGG CGCCACCATG
ATCGAAGGCT GGGGCATGAG CGAGACCTGC GCCATCGGCA CCAACAACCC GGTGAACAGC
ACCGCCTTCA GCGGCAGCAT CGGCCTGCCG CTGCCGGGCA TCGACATCGC CATCAAGGAC
GACGCAGGCG CGAGCCTGCC CATCGGCTCG GCGGGCGAGA TCTGCATCAA GGGCCCCAAC
GTGATGCCCG GCTACTACAA CCAACCCGAG GAAAATGCCA AGGCCTTCAC GCCCGACGGC
TTCATGCGCA CGGGCGACAT CGGCGTGATG GACGAGGAGG GCTATACGCG CATCATCGAC
CGCAAGAAGG ACATGATCCT GGTGAGCGGC TTCAACGTCT TCCCCAACGA ACTGGAGCAG
GTGGTGGCCC TGTGCCCGGG CGTGCTGGAA TGCGCCGCCG TGGGCGTGGC CGACGACAAG
CAGGGCGAAG CCATCAAGGT GTTCGTGGTG CGCAGCGACC CCTCGCTGAC CGAGGACGAC
GTGGTGCGCT ACTGCCATGA ACACCTGACC GGCTACAAGC GGCCAAAATA CATCGAATTC
CGCGACGAAC TGCCCAAGAC CAACGTGGGC AAGATCCTGC GACGGGAACT GCGCGACGGC
AAGTGA
 
Protein sequence
MERIWLKNYP AGVPHDVDAD AYPSVAQMLE ESFHRHADSP FSVCMDRWMS YRELDRLSAR 
LGAWLQGQGL APGARVAIML PNVPQFAVTM AAVLRAGYTC VNVNPLYTAR ELEHQLKDSG
ASAIVILENF AHTLAEVIDH TAVQHVVIAS MGDLLGAWYG RWITFAVRHL AKMVPAYELP
LTGGRQVISF KRALALGERR TLTPARVAPD TPAFLQYTGG TTGLSKGAVL TQRNIVAATL
QAEAWFTPAL GKIGDLSRAN SIAALPLYHI FALTLCLLAI RQGSRLTLIP NPRDIPKFVE
VLKKRPFHML PAVNTLFNAL LQNPQFRHLD FSQLCVAQAG GMAATEATAQ QWKAVTGATM
IEGWGMSETC AIGTNNPVNS TAFSGSIGLP LPGIDIAIKD DAGASLPIGS AGEICIKGPN
VMPGYYNQPE ENAKAFTPDG FMRTGDIGVM DEEGYTRIID RKKDMILVSG FNVFPNELEQ
VVALCPGVLE CAAVGVADDK QGEAIKVFVV RSDPSLTEDD VVRYCHEHLT GYKRPKYIEF
RDELPKTNVG KILRRELRDG K