Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0516 |
Symbol | |
ID | 4673200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 537647 |
End bp | 539332 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639837645 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_984842 |
Protein GI | 121592946 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0152867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGAA TCTGGCTCAA GAACTACCCC GCTGGCGTGC CGCACGACGT GGATGCCGAT GCCTACCCCT CGGTGGCGCA GATGCTGGAG GAGTCCTTCC ACCGCCACGC CGACAGCCCG TTCTCGGTGT GCATGGACCG GTGGATGAGC TACCGCGAAC TCGACCGCCT GTCGGCCCGG CTCGGCGCGT GGCTGCAGGG CCAGGGTCTC GCGCCCGGTG CGCGCGTGGC CATCATGCTG CCCAACGTGC CGCAGTTCGC GGTGACCATG GCCGCCGTGC TGCGCGCGGG CTACACCTGC GTGAACGTGA ACCCGCTGTA CACGGCGCGC GAGCTGGAGC ACCAGCTCAA GGACTCGGGC GCCTCGGCCA TCGTCATCCT GGAGAACTTC GCGCACACGC TGGCCGAGGT GATCGACCAC ACGGCCGTGC AGCATGTGGT GATCGCCTCC ATGGGCGACC TGCTGGGCGC CTGGTACGGA CGCTGGATCA CCTTTGCCGT GCGCCACCTG GCCAAGATGG TGCCCGCGTA CGAGCTGCCC CTGACGGGCG GGCGCCAAGT GATCAGTTTC AAGCGCGCGC TGGCCCTGGG CGAGCGGCGC ACGCTGACCC CGGCGCGCGT CGCGCCCGAC ACTCCGGCCT TCCTGCAGTA CACGGGCGGC ACCACGGGCC TGTCCAAAGG CGCAGTGCTC ACCCAGCGCA ACATCGTCGC CGCGACGCTG CAGGCCGAGG CCTGGTTCAC CCCCGCGCTG GGCAAGATCG GCGACCTGAG CCGCGCCAAC AGCATTGCCG CGCTGCCGCT GTACCACATC TTCGCGCTCA CGCTGTGCCT GCTGGCCATC CGCCAGGGCT CGCGCCTGAC GCTGATCCCG AACCCGCGGG ACATCCCCAA GTTCGTGGAG GTGCTGAAGA AGCGCCCCTT CCACATGCTG CCCGCCGTGA ACACGCTGTT CAACGCACTG CTGCAGAACC CGCAGTTCCG CCATCTGGAT TTCTCGCAGC TGTGCGTGGC GCAGGCCGGC GGCATGGCCG CGACCGAGGC CACGGCCCAG CAGTGGAAGG CCGTGACGGG CGCCACCATG ATCGAAGGCT GGGGCATGAG CGAGACCTGC GCCATCGGCA CCAACAACCC GGTGAACAGC ACCGCCTTCA GCGGCAGCAT CGGCCTGCCG CTGCCGGGCA TCGACATCGC CATCAAGGAC GACGCAGGCG CGAGCCTGCC CATCGGCTCG GCGGGCGAGA TCTGCATCAA GGGCCCCAAC GTGATGCCCG GCTACTACAA CCAACCCGAG GAAAATGCCA AGGCCTTCAC GCCCGACGGC TTCATGCGCA CGGGCGACAT CGGCGTGATG GACGAGGAGG GCTATACGCG CATCATCGAC CGCAAGAAGG ACATGATCCT GGTGAGCGGC TTCAACGTCT TCCCCAACGA ACTGGAGCAG GTGGTGGCCC TGTGCCCGGG CGTGCTGGAA TGCGCCGCCG TGGGCGTGGC CGACGACAAG CAGGGCGAAG CCATCAAGGT GTTCGTGGTG CGCAGCGACC CCTCGCTGAC CGAGGACGAC GTGGTGCGCT ACTGCCATGA ACACCTGACC GGCTACAAGC GGCCAAAATA CATCGAATTC CGCGACGAAC TGCCCAAGAC CAACGTGGGC AAGATCCTGC GACGGGAACT GCGCGACGGC AAGTGA
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Protein sequence | MERIWLKNYP AGVPHDVDAD AYPSVAQMLE ESFHRHADSP FSVCMDRWMS YRELDRLSAR LGAWLQGQGL APGARVAIML PNVPQFAVTM AAVLRAGYTC VNVNPLYTAR ELEHQLKDSG ASAIVILENF AHTLAEVIDH TAVQHVVIAS MGDLLGAWYG RWITFAVRHL AKMVPAYELP LTGGRQVISF KRALALGERR TLTPARVAPD TPAFLQYTGG TTGLSKGAVL TQRNIVAATL QAEAWFTPAL GKIGDLSRAN SIAALPLYHI FALTLCLLAI RQGSRLTLIP NPRDIPKFVE VLKKRPFHML PAVNTLFNAL LQNPQFRHLD FSQLCVAQAG GMAATEATAQ QWKAVTGATM IEGWGMSETC AIGTNNPVNS TAFSGSIGLP LPGIDIAIKD DAGASLPIGS AGEICIKGPN VMPGYYNQPE ENAKAFTPDG FMRTGDIGVM DEEGYTRIID RKKDMILVSG FNVFPNELEQ VVALCPGVLE CAAVGVADDK QGEAIKVFVV RSDPSLTEDD VVRYCHEHLT GYKRPKYIEF RDELPKTNVG KILRRELRDG K
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