Gene Ajs_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0512 
Symbol 
ID4673126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp532302 
End bp533006 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID639837641 
Productputative hydroxylase 
Protein accessionYP_984838 
Protein GI121592942 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.647783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.011367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTCACA CCGCAACCAC CATGCTGATC TCCATCGACC AGGTCCTCTC CAAGACGGAG 
GTGCGCGACT TTCGCGCCCA ACTGGACGCC GCCGCCTGGG AGGACGGCGC CGCCACCGCC
GGCACGCTGG CCAAGAGCGT CAAGCGCAAC CAGCAGATCA CCGACGGCAG CGAACTCTGC
CAGCGCCTGG GCCAGCACAT CCTGCGCCGG CTGAGCAGCA CGCCGCTGTT CATCAGCGCC
GCGCTGCCGC GCACCATCTA CCCGCCGAAG TTCAACCGCT ACGCCGACGG CGGCACCTAC
GGCGCGCACG TGGACAGCGC GCTCATGTTC CTGCCCGGCA GCCACCAGCA GATGCGCACC
GACCTGTCGG CCACGCTGTT CCTGGCCGAG CCCGAGGAAT ACGACGGCGG CGAGCTGGAA
GTGGAGGGCC CCTTCGGCGT GCAGGCCGTG AAGCTGGCCG CCGGCGACAT GGTGCTGTAC
CCCTCCAGCA GCCTGCACCG CGTCACGCCC GTCACGCGCG GGGCGCGCGT GGCCTCGTTC
TTCTGGATCG AGAGCCTGGT GCCCGACGAG GGCGAGCGCA CGCTGCTGTT CGACCTGGAC
CAGTCCATCC AGCAACTCAC GCCGCTGGTG GCGCCCGACG ACCCGCGCCT GGTACAGCTC
ACGGGCGTGT ACCACAACCT GCTGCGCCGC TGGGCCAGGC CCTGA
 
Protein sequence
MPHTATTMLI SIDQVLSKTE VRDFRAQLDA AAWEDGAATA GTLAKSVKRN QQITDGSELC 
QRLGQHILRR LSSTPLFISA ALPRTIYPPK FNRYADGGTY GAHVDSALMF LPGSHQQMRT
DLSATLFLAE PEEYDGGELE VEGPFGVQAV KLAAGDMVLY PSSSLHRVTP VTRGARVASF
FWIESLVPDE GERTLLFDLD QSIQQLTPLV APDDPRLVQL TGVYHNLLRR WARP