| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0509 |
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| Symbol | |
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| ID | 4673105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 529372 |
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| End bp | 531345 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837638 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_984835 |
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| Protein GI | 121592939 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0558632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TGACACCGCT GATCGCCGGC GCTGCGCTGG CCACCGCCGC GCCGTGGGCC
GGGGCGCAAA ACCGCGGCGA TGACACCGTC CTGGAGATGC AGAAAGCCTT CCGCAAGGGC
GACAAGCAGC GGCTTGCCGC GCTGCTGCCG GCCGCGCGCG GCCATGCCCT GGAGCCCTGG
GCTGCGTACT GGGAACTGCG TGCGCGGCTG GAGGAGGCCC AACCCTCCGA AGTGACCGCC
TTCCTGCAGC GATGGGCGGG CACCTACCAG GAAGACCGTC TGCGCAACGA CTGGCTGCTG
CTGCTGGGCC AACGCCGCGA CTGGGACCAG TTCGCAGAAT TTCACCCGCA GTTCCGCATG
GGCGATGACC GCGAGGTGCA TTGCTACGCG CTCGCGATCG AGCAGATCAA GGGCACGGCC
GCCGAGAGTG CCGGCGCTGA GATGCTGCGC CACTGGTATG CGCTGCGCGA GCTGGACGAC
GGCTGCTCCA GTGCCGCCGC CGAGATGCTG GCCGCCAAGA AAATCAAGCC CCTGGACGTG
TGGCGCAAGG CGCGTCTGGG CGCAGAGGCC AACCGCCTGC GCGTGGTGCG CAAGGCGGTG
GAAATCGTCG CGCCCGATGC GCTGCCGCAA CTGCGCGAGG CGCTGGATTC GCCCACCAAG
TACCTCACGG GCCGCGCCAC GGCGCGTGGC AAGGAGCGTC AGGAACTGGT GGTGCTGGCG
CTGACCCGCA TGGCCATGAG CGATGTCGCC AACGCCGCCA GCCTGCTGGA CAGCAAATGG
GGGCCGCACC TGTCGGCCGA GGAGCGCAAC TGGCTCTGGG GCCTGATCGG CAAGCAGGCC
GCCACGGCGC TGTCGCCCGA TGCGCTCAGC TACTACGCCA ACGTGGGCCG CGATGCCGAC
CTGACCGACG ACATGCTGGC CTGGCGCGCG CGCGCCGCGC TGCGGGCCGG GCAATGGAAG
CTGGTGGGCC GCAGCATCGA TGCCATGAGC CCCGCGGCGC GCCAGGAAAG CGTCTGGACG
TACTGGAAGG CGCGCGCCCT CATGGCCAAC CGCCCCGGCG ACGAGGATCG CGCGGCCGCG
CGCCAGCTGT ATGCGCGCAT CGCCGGCACC ACGGGTTTTT ATGAACAGCT GGCGCTGGAG
GAGCTGGGCG AGCGCGTCAC GCTGCCCCCG GCGCCCGCAC CGCTGACCGA GGAAGAGAAA
GCCACCGCGC GCGCCAACCC CGGCCTGAAC CGTGCGCTGT ACGCCATCCT GATGGGCCTG
CGCAGCGAAG GCGTGCGCGA GTGGAACTAC ACCACCAACC TGCACACCCC TGGCGGCATG
GGCGAGCGCG AGCTGCTGGC CGCGGCCGAC TTCGCCTGCC AGCGCGAGGT GTGGGACCGC
TGCATCAACA CCAGCGAGCG CACCAAGGGC GTGATCGACG CGGCGCAGCG CTTTCCGATG
CCGTTCCGTT CCGCCGTGGT GGAGCGCGCG CGGGGCATCG GGCTGGACCC GGCCTATGTC
TATGGCCTGA TCCGCCAGGA AAGCCGCTTC ATCATGGATG CCCGCTCGGG CGTGGGCGCG
TCGGGCCTGA TGCAGGTGAT GCCCGCCACC GCGCGCTGGA CGGCGCGCAA GATCGGCCTG
GAGGGCTTCT CCCCCCAGCA GCTCTACGAC CGCGACACCA ACATCACCAT CGGCACCGCC
TATCTGAAGC TGGCGCTGGA CGACTTCGAC GGTTCCATGC CCCTAGCGGC GGCAGCCTAC
AACGCCGGCC CGGGCCGCCC GCGCAACTGG CGCAACGGCC CGGTGCTGGA CGCGGCCATC
TGGGCCGAGA ACGTGCCCTT CAGCGAGACG CGCGACTATG TGAAGAAGGT GCTGGCCAAC
ACGGTGAACT ACGCCGCCAT CCTTACCGGC CAGCCGCAGT CGCTCAAGAG CCGGCTGGGC
ACCGTGGGCC CGCGCGACGC GCGCGCGCCG GAGCCGAACA AGGATCTGCC TTGA
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| Protein sequence | MKILTPLIAG AALATAAPWA GAQNRGDDTV LEMQKAFRKG DKQRLAALLP AARGHALEPW
AAYWELRARL EEAQPSEVTA FLQRWAGTYQ EDRLRNDWLL LLGQRRDWDQ FAEFHPQFRM
GDDREVHCYA LAIEQIKGTA AESAGAEMLR HWYALRELDD GCSSAAAEML AAKKIKPLDV
WRKARLGAEA NRLRVVRKAV EIVAPDALPQ LREALDSPTK YLTGRATARG KERQELVVLA
LTRMAMSDVA NAASLLDSKW GPHLSAEERN WLWGLIGKQA ATALSPDALS YYANVGRDAD
LTDDMLAWRA RAALRAGQWK LVGRSIDAMS PAARQESVWT YWKARALMAN RPGDEDRAAA
RQLYARIAGT TGFYEQLALE ELGERVTLPP APAPLTEEEK ATARANPGLN RALYAILMGL
RSEGVREWNY TTNLHTPGGM GERELLAAAD FACQREVWDR CINTSERTKG VIDAAQRFPM
PFRSAVVERA RGIGLDPAYV YGLIRQESRF IMDARSGVGA SGLMQVMPAT ARWTARKIGL
EGFSPQQLYD RDTNITIGTA YLKLALDDFD GSMPLAAAAY NAGPGRPRNW RNGPVLDAAI
WAENVPFSET RDYVKKVLAN TVNYAAILTG QPQSLKSRLG TVGPRDARAP EPNKDLP
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