| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0496 |
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| Symbol | |
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| ID | 4672585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 517145 |
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| End bp | 517930 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837626 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_984823 |
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| Protein GI | 121592927 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0473977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTCTC CTGCCCGCCC CCGCACCGTG CTGGTGACAG GCGCCGCCCG GCGCCTGGGC
CGCAGCATTG CGCTGGCGCT GGCGGCCGGG GGCTGGCAGG TGGCCGTGCA TTACCGGTCT
TCGCAACAGG ACGCTCTTGA AACCGTAGCT GCTTGCGCAG AACTGGCGGG TGCTAGCGCG
CATTTTGATG CTGATTTTGC CGATGAAGCG GCCGCACGCG CCCTGTTGCC GCGCGTGGTG
GCGCACTTCG GTGCGGTGGA TGCGGTGGTC AACAGCGCCT CGCTGTTCGA ACACGACACG
GCCTCCAGCT TCAGCTACGC GCTGCTGGAG CAGCACCTGC GCAGCAACAC CGGCGCACCC
GTGCTGCTGG CGCAGGCGCT GCATGCCCAT CTGGAGCAGC GCGCCGCCGC GGGCGAAGCC
GACGTGCAAG GCGCGGTGGT GAACCTGCTG GACCAGAAGC TGTGGAACCT GAACCCGGAC
TTCCTGAGCT ACACGCTCTC GAAGGCCGCG CTGGAAGCCG CCGGCACCAT GCTGGCCATG
GCGCTCGCGC CGCGTGTACG CGTGGTGGGC GTGGCGCCGG GGCTCACCCT CACCAGCCAT
CTGCTGACGG GCGAGCGCTT TGAGCGCATG CACGCACTGA GCCCGCTGGG CCGCTCGTCC
ACGCCGGAAG ACGTGGCCGC CGCCGTGCGT TTCGCGCTGG ACAATCGCTC GCTCACCGGC
ACCACGCTGC TGGTGGACGG CGGCCAGCAC CTGATGCGCT TCGAGCGCGA CTTCTCCCTG
ATGTGA
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| Protein sequence | MTSPARPRTV LVTGAARRLG RSIALALAAG GWQVAVHYRS SQQDALETVA ACAELAGASA
HFDADFADEA AARALLPRVV AHFGAVDAVV NSASLFEHDT ASSFSYALLE QHLRSNTGAP
VLLAQALHAH LEQRAAAGEA DVQGAVVNLL DQKLWNLNPD FLSYTLSKAA LEAAGTMLAM
ALAPRVRVVG VAPGLTLTSH LLTGERFERM HALSPLGRSS TPEDVAAAVR FALDNRSLTG
TTLLVDGGQH LMRFERDFSL M
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