| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0489 |
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| Symbol | |
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| ID | 4672324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 511755 |
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| End bp | 512759 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639837619 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_984816 |
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| Protein GI | 121592920 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03637] CRISPR-associated endonuclease Cas1, YPEST subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.121384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACA TTGCTGCCGG TGACCTCAAG GCCATACTGC ATTCCCAGAG GGCCAACATC
TACTATCTGG AGCACTGCCG GGTGCTCGTC AATGGCGGCC GCGTCGAGTA CGTGACCGAC
GCGGGCAAGC GAAGCCTGTA CTGGAACATT CCCATTGCCA ACACCACGAG CATCTTGCTG
GGGACGGGCA CCTCGATCAC GCAGGCCGCC ATGCGAGAAC TGGCGAAGGC AGGCGTACTG
GTGGGCTTCT GCGGTGGTGG CGGTACGCCG CTTTTCGCAG CCAATGAAGT CGACGTAGAA
GTAGCTTGGC TCACACCGCA GAGTGAGTAC CGGCCCACCG AATACCTGCA GTACTGGGTG
AAGTTCTGGT TCGATGAGGA ACTGCGCCTG CACGCCGCGA AGCAGTTGCA GACCTGGCGA
CTGCAGCGGC TGGCGGCCGA ATGGAACAGC CGCTCTTTGC GTGAAGCCGG TTTTTCCATC
GATCTGGGTC GTTTGCAGAG CCTGGTGCAG CAGTTCACAC CACTGATCAG CAACGCCCCT
GATGTGACAG CGCTGCTGAC TGACGAGGCA CGCTTGACCA AGGCCCTCTT CAGGCTGGCC
GTGGAAGCCG TGGGCTACGG GGAATTCACG CGGGCCAAAC GCGGAACGGG TACCGACGCT
GCGAACCGCT TCCTTGACCA TGGCAACTAT CTGGCCTATG GCCTGGGCGC TACCGCGACC
TGGGTGTTGG GCCTGCCGCA CGGGCTGGCG GTATTGCACG GCAAGACGCG ACGGGGTGGT
CTGGTATTCG ACGCAGCAGA CTTGATCAAG GATGCAGCCA TCCTGCCGCA AGCCTTTCTG
TCGGCGATGC GGGGCGATGA TGAACAGCAG TTCCGCCGCC AATGCATAGA GGCGTTGACG
CGCAGCGAAT CATTGGATTT CATCATCGAC ACACTCAAAC ACATCGCCAG CACGACGTCG
CGGCTGGCCG ACGCGCCCCC TCCTGTTCGG GAGCCAAATG CATGA
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| Protein sequence | MEDIAAGDLK AILHSQRANI YYLEHCRVLV NGGRVEYVTD AGKRSLYWNI PIANTTSILL
GTGTSITQAA MRELAKAGVL VGFCGGGGTP LFAANEVDVE VAWLTPQSEY RPTEYLQYWV
KFWFDEELRL HAAKQLQTWR LQRLAAEWNS RSLREAGFSI DLGRLQSLVQ QFTPLISNAP
DVTALLTDEA RLTKALFRLA VEAVGYGEFT RAKRGTGTDA ANRFLDHGNY LAYGLGATAT
WVLGLPHGLA VLHGKTRRGG LVFDAADLIK DAAILPQAFL SAMRGDDEQQ FRRQCIEALT
RSESLDFIID TLKHIASTTS RLADAPPPVR EPNA
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