Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0468 |
Symbol | |
ID | 4672524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 481387 |
End bp | 482316 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639837598 |
Product | inner-membrane translocator |
Protein accession | YP_984795 |
Protein GI | 121592899 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0918895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.15939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCT TTCTCGAAAC CCTGATCGGC GGCCTGATGG CCGGCATGCT CTACGCGCTG GTGGCACTCG GCTTCGTGCT GATCTTCAAG GCCTCGGGCG TCTTCAACTT CGCGCAGGGT GCCATGGTGC TGTTCGCGGC CCTGGCCATG GCGCGCTTTG CCGAGTGGAT CCCGGCGTGG ACCGGCATCA GCAACCCCAT CGTGGCCAAT CTGGCCGCGT TCCTGATCGC GGGCCTGTGC ATGTTCGCAG TGGCCTGGTT CATCGAGCGC CTCGTGCTGC GCCACCTCGT GAACCAGGAA GGCGCCACGC TGCTCATGGC CACGCTGGGC ATCACCTACT TCCTGGAAGG CCTGGGCCAG ACCCTCTTCG GCAGCGACAT CTACAAGATC GACATCGGCA TGCCCAAGGA CCCGGTGTTC CTGCTGGACA CCGTGTTCGA GGGGGGCGTG CTCGTGAACA AGGAAGACGT GATTGCCGCA GGCATTGCCG CCGCCCTGGT GGTGGTGCTG AGCATCTTCT TTCAAAAGAC CAAGACCGGC CGCGCATTGC GCGCCGTGGC CGACGACCAC CAGGCGGCGC AGTCCATCGG CATCCCGCTC AACCACATCT GGGTCATCGT GTGGTGTGTC GCCGGTGTCG TGGCACTGGT GGCCGGGATG ATCTGGGGCT CCAAGCTGGG CGTGCAGTTC TCGCTGACCA CGGTGGCGCT GCGCGCGCTG CCGGTGGTGA TCCTGGGCGG CCTGACCTCG GTGCCGGGCG CCATCATCGG CGGGCTGATC ATCGGCGTGG GCGAGAAGCT CTCCGAGGTG TACCTGGGCC CCTTCGTGGG CGGCGGCATC GAGATCTGGT TTGCCTACGT GCTGGCCCTC GTGTTCCTGC TGTTCCGGCC CCAAGGTTTG TTCGGCGAGA AGATCATCGA TCGCGTATGA
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Protein sequence | MAFFLETLIG GLMAGMLYAL VALGFVLIFK ASGVFNFAQG AMVLFAALAM ARFAEWIPAW TGISNPIVAN LAAFLIAGLC MFAVAWFIER LVLRHLVNQE GATLLMATLG ITYFLEGLGQ TLFGSDIYKI DIGMPKDPVF LLDTVFEGGV LVNKEDVIAA GIAAALVVVL SIFFQKTKTG RALRAVADDH QAAQSIGIPL NHIWVIVWCV AGVVALVAGM IWGSKLGVQF SLTTVALRAL PVVILGGLTS VPGAIIGGLI IGVGEKLSEV YLGPFVGGGI EIWFAYVLAL VFLLFRPQGL FGEKIIDRV
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