Gene Ajs_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0462 
Symbol 
ID4672706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp474060 
End bp475097 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID639837592 
Producthypothetical protein 
Protein accessionYP_984789 
Protein GI121592893 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.170176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACA CATCCAGCCC ACGCCGCACC CCACCGCGCC GCCAGGCCCT GCACGCCATC 
GCGGCGCTTC TTGCATTGGG CCTGGGCGCC ACGGGCGCCG CGTATGCCCA AGCCAGCCCA
TGGCCGGCCA AGCCGGTCCG CATCGTGGTG CCGTTCGCCG CCGGGGGTAC CACCGACATC
CTGGCGCGCG CCATTGCGCC CGAGCTGGGC AAGGCCTTTG GCCAGCAGTT CATCGTGGAC
AACCGCGGCG GCGCGGGAGG CAACATCGGT GCCGAACTGG TGGCCAGGTC CGCCCCTGAC
GGCTACACGC TGCTGATGGG CACCGTGGGC ACGCATGGCA TCAACCGCGC GCTGTACAAG
CAGCTACCCT ACGACCCGAT CAAGGACTTC GCGCCCGTGA CGCTTGTCGC GTCGGTGCCC
AACGTGATGG TCATGAACAC CGAGAAGGCG CGCAGCCTGG GCATCAACAC CGTGCAGGAC
TTCATCCGCT ATGCCCAAGC CAACCCGGGC AAGCTCAACA TGGCGTCCAG CGGCAACGGC
ACCTCGATCC ACCTGGCCGG CGAGCTGTTC AAAAGCATGA CCGGCACCTA CATGCTGCAC
ATGCCCTACC GCGGATCTGC GCCCGCGCTG CTGGACATGG TGGGCGGCAA CATGGACGTG
ATGTTCGACA ACCTGCCCTC CTCCATGGCC CATATCAAGG GCGGCAAGCT CAAGGCGCTG
GCGGTCACCA GCGCGAAACG CTCCACCGCC CTGCCCGACG TCCCCACGGT GGAAGAGGCC
GGCGGCCCCG CGCTCAAGGG CTTCGAAGCC AGTTCATGGT TCGGACTGCT GGCGCCCGCG
GGCACGCCGG CCGACATCGT CCAGCGCGTC CAGCAGGAGG TGGCCAAGGC GCTGGCCACC
CCTGCCGTCA AGGAGCGACT GCTGTCCCAG GGAGCGATTC CCGGCGGCAA TACCAGCGCC
GAATTTGCCA GCCTGATCGA CCGCGAGCAC CGCAAATGGG CGCAGGTGGT GAAGGCGTCG
GGTGCGAAGG TGGATTGA
 
Protein sequence
MPHTSSPRRT PPRRQALHAI AALLALGLGA TGAAYAQASP WPAKPVRIVV PFAAGGTTDI 
LARAIAPELG KAFGQQFIVD NRGGAGGNIG AELVARSAPD GYTLLMGTVG THGINRALYK
QLPYDPIKDF APVTLVASVP NVMVMNTEKA RSLGINTVQD FIRYAQANPG KLNMASSGNG
TSIHLAGELF KSMTGTYMLH MPYRGSAPAL LDMVGGNMDV MFDNLPSSMA HIKGGKLKAL
AVTSAKRSTA LPDVPTVEEA GGPALKGFEA SSWFGLLAPA GTPADIVQRV QQEVAKALAT
PAVKERLLSQ GAIPGGNTSA EFASLIDREH RKWAQVVKAS GAKVD