| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0452 |
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| Symbol | |
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| ID | 4671511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 465207 |
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| End bp | 466355 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837582 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_984779 |
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| Protein GI | 121592883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.128382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAA CGCGGTTGAG CCGTCGGCAA TTCTCGGCAG GGATGGGCGC GGCCCTGCTG
ACCGGCGCAT CCCTGACGCG CGCGCAGAGC GACACGCGCA TTGTGCTGGG CCAATCCGCG
GCCCTGACCG GGCCTGCCAG CCAATTGGGC CTGCAGTTCC AGGCGGGTGC CAAGCTGGCG
TTCGACCAGG TCAATGCCCA GGGCGGCATC GGGCGGCGCA CCATCGAGCT GCGCTCGCTG
GACGACGGCT ACGAGCCCGA CCGCTGCGCC GAGAACACGC GCCGCTTGAT CAATGAGGAC
GTGCTGGCCC TCTTTGGCTA CGTGGGCACG CCCACCAGCC TGGCCGCGCA ACCACTGTTC
ACGCAGGCCA AGGTGCCATT CTTCGCGCCC GTCACGGGCG CGGAATCCCT GCGCCAGCCG
TTCAACCGCC TGGCCTTCCA CGTGCGCGCC TCCTACGCGG ACGAGGCCGA ACTCATCGTG
CGCCAGCTCA CCAACCTGGG GCTGGACCGC ATCGGCGTCT TCTACCAGGA CGACGCCTAT
GGCAAGGCTG GCCTGGACGC CGTGACCCGC GCACTGGCCA CGCGCAAGCT GGCGCCCGTG
GCGACCGGCA CGGTGGCGCG CAACTCCGCC AACGTGACGG CTGCCGTGGC GCCGCTGGTG
GCGGCGCAGC CCGTGGCCAT CGTGCAGATC GGTGCCTATG CCGCCAGTGC GGCGTTCGTG
CTGGCCGCGC GCAAGGCGGG ATACGGCGGC AAGTTCTACA ACGTGTCCTT CGTGGGCACG
CAGGCGCTGG CGGATGCGCT GGGCGCCAAC GGCGCGGGCG TGGTGGTGTC GCAGGTGGTG
CCTTCGCCCT ACCAACAGTC GCGCCAGATC ACGCGTGAAT TCCAAGAGGC CATCAAGAAG
GGCGGCAACG TGCAGGCCAA CTACTCCAGC ATGGAGGGCT ACCTGGCCGC GCGCGTCTTC
ATCGAGGGGC TGCGCAACGC GCAGGCGCAC GCCAGCGGCA AGCTCACGCG CGAGAGCCTG
GTGGCGGGGC TGGAATCCCT GCGCGGTTCG GTGGGCGGCT TTACGGTCAA CTTCAGCCCG
TCCGACCATG AGGGCTCGCG CTTCGTGGAG ATGTCCATGC TCACCGGCGA CGGCCGCGTG
CGCACCTGA
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| Protein sequence | MHSTRLSRRQ FSAGMGAALL TGASLTRAQS DTRIVLGQSA ALTGPASQLG LQFQAGAKLA
FDQVNAQGGI GRRTIELRSL DDGYEPDRCA ENTRRLINED VLALFGYVGT PTSLAAQPLF
TQAKVPFFAP VTGAESLRQP FNRLAFHVRA SYADEAELIV RQLTNLGLDR IGVFYQDDAY
GKAGLDAVTR ALATRKLAPV ATGTVARNSA NVTAAVAPLV AAQPVAIVQI GAYAASAAFV
LAARKAGYGG KFYNVSFVGT QALADALGAN GAGVVVSQVV PSPYQQSRQI TREFQEAIKK
GGNVQANYSS MEGYLAARVF IEGLRNAQAH ASGKLTRESL VAGLESLRGS VGGFTVNFSP
SDHEGSRFVE MSMLTGDGRV RT
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