| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0448 |
|---|
| Symbol | |
|---|
| ID | 4671696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 460022 |
|---|
| End bp | 460810 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639837578 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_984775 |
|---|
| Protein GI | 121592879 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGG AACGCGTCGG CATTCAGTCG GTGGAGGTGG GGTTCGCGCT GCTGGACGCG
CTGTCGCGCG CCCGCGGGCC GCTGATGCTC AAGGACCTGG CGCAGGAGGC CGGCATGAGC
GCGGCCAAGG CCCACCGCTA CCTGGTGAGC TTTCAGCGCC TGGGCCTGGT GGTGCAGGAC
GCCCGCAACG CCCGTTACGA CCTGGGCCCT GCGGCACTCA AGTTAGGGCT TGCTTCGCTG
GCACGCCTCG ATGCCATGCG GCTGGCGCGC GAGCGCATGG CGCCACTCAT GGATGCGCTG
GGCCACACGC TGGCGCTGGC CGTCTGGGGC AACCATGGAC CGACCATCGT GCACTGGGAG
GAGGCACCAC GCGCGCTCAC GGCCAACCTG CGCCTGGGCG ACGTGATGCC GCTGCTCAGC
TCCGCCACGG GCCGCTGCTT TGCCGCTTAC CTGCCACGCG AGAAGACCGC CGCGCTGATA
GCCGAGGAGT TGGCCCTGGC CACCCGCCAG GGCCGCGCCG ACCTGCCGCA CGACGAGGCC
GGCGTGCAGG CACTGCTGCG CGAGGTGCGC GAGCGCCGCT GCGCGCGGGT GCTGGACACG
CTGCTGCCGG GCATCCACGC TTTCTGCGCG CCCGTGTTCG ACGCCGGCGG CCACCTGGCC
CTGGCCATCA CCACGCTGGG CCCCGCCGCC ACGTTCGACG CCGCCTGGGG CGGTGCGATA
GAGGCCCCGC TGCGCGCCGC GGCGGAGCAG CTCTCGCGCG ACCTGGGTCA CGCCGCCACA
CCCGGCTGA
|
|---|
| Protein sequence | MDKERVGIQS VEVGFALLDA LSRARGPLML KDLAQEAGMS AAKAHRYLVS FQRLGLVVQD
ARNARYDLGP AALKLGLASL ARLDAMRLAR ERMAPLMDAL GHTLALAVWG NHGPTIVHWE
EAPRALTANL RLGDVMPLLS SATGRCFAAY LPREKTAALI AEELALATRQ GRADLPHDEA
GVQALLREVR ERRCARVLDT LLPGIHAFCA PVFDAGGHLA LAITTLGPAA TFDAAWGGAI
EAPLRAAAEQ LSRDLGHAAT PG
|
|---|
| |