| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0429 |
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| Symbol | |
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| ID | 4671443 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 435092 |
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| End bp | 437343 |
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| Gene Length | 2252 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 72% |
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| IMG OID | 640068290 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTGCCAT GGGTGCGGCC TGGGCCTGGG CGGGCGGCCG CCTTGCAGTA CCTGCCCCTG
GAGCCGCAGG CGCTGCAGTC CCTGCTGCAG TACAAGAGCG GGCTGGACGC CGTGCTGGCG
GGTGCTCTGC TGGGCTGGCT CCTGCTGCGC TGGCGCCGGG GCGGGAGCCG GCGCACCCTG
GCGCGCCGGG TGGAGCAGGT GCTGCGCCAC GCGCCCGCCG GCATGGCGCG GCTGAGCATG
GACGGCCGCC TGGTGTGGGC CAATGAACGC CTGCGTGAAT GGCTGGGCGT GGCGCCGCAC
GAGCCGCTGC CGCAGGTCGA CTTCCGAACG CTGGTGCGCC CGCACGACAG CGATTGGGCG
CAGCGGCAAC TGCAGCGGCT GCGCGCCGGC GAGATCGACC ATTACCAGGG CGAGCGCTGG
TGCCGCAACC AGCGCGATGG ATCGCAGCTG CCCGTGCTGT GCACCGTGAG CCATGTGCTG
GCCCTGGAGA GCGAGCCCGA CCACCTGGTG TGCGTACTGC AGTCCCTGCG CGAAGTGCAT
GCCGCGCGCG ACGCGCAGGC GCTCAGCGAA CAGCGCTGGC GCTTGGCGGC CACGGTGGTG
GACAACACCA TCGAAGGCGT GGTGGTCACC GATGCCGACG GCCGCATCCT CTCGGTCAAC
CCGGCCGTCA CGCGGCTCAT GGGCTATACC GAGGAAGAGT TGCTGGGCCA GAACCCGCGC
GTGTTCAAGT CGGGGCGGCA TGGACCGGCG TTCTACGAGG CCATGTGGGA CACCATGCGC
CAGACGGGCC ACTGGCAGGG GGAGATATGG AACCGGCGCA AGAACGGCGA GGTGTTCCCG
GAGCGCATGT CGCTCTCGGC CGTGCGCGGC GCGGACGGCG CGGTGACGCA CTACGTGTGC
ATGTTCACCG ACATCTCCGA GGAAAAGGCC CAGCACCAGC GCCTGGAGTT CCTGGCGCAC
TGCGACCCGC TGACCGGCCT GCCCAACCGC GCCTGGTTTG GCGAGCAGCT CGACAGCGCC
GTGCGCCAGG CACAGGACAG CGGCGAGCAG ATGGCCCTGC TGCTCCTGAA CCTGGACCGC
TTCAAGGACG TGAACGACAG CTACGGCCAC GCCGTGGGCG ACGAGGTGCT CAGGCACACA
CCCGCCAGGT GGAGCAGAGC CTGCGCCCGG GCGATCTGCT GGGGCGGCTG GCCGGCGACG
AGATCGCCGT GCTGGCCCGC CACCTGCGCC ATGCGGACGG CGCGGCAGCC GTGGCGCGGC
ACCTGATCGC CGCGGCCAGC ACGCCCTGGT GCACGCCCGA TGGCATCGAG GTGGTGGTGG
GCGTGAGCGT GGGCATCTGC ATGTTCCCCG GGCATGCGCG GACCACCGAG GCGCTGCTGC
AGGGCGCGCA TTCCTCGGTG TACGGCGCCA AGGCCCGCGG GCGCGGCGCG TATTGCTTCT
TTGACGAATC GCTCATTCAG GCCGCGCGCG AGCGCCTGGA GATCGAGGCG CGGCTGCGCG
TGGCCCTGGC GCAGGGGCAC CTGCGGCTGT ACTACCAGCC GCAGGTATGC ATCGCCACCG
GCCGGATCAT GGGGGCCGAG GCGCTGGTGC GCTGGCTGGA CCCGCAGGAG GGCATGATCT
CGCCCGCGCG CTTCATCCCC GTGGCCGAGA CCTCGGGCGT GATCGGCCCG CTGGGCCAGT
GGGTGATGCG CGCCGCCTGC GAGCAGGGCC AACGCTGGCG CGCCGACGGC CTGCCGGAGA
TCCGCCTGGC CATCAACCTC TCGCCGCGCC AGTTCCAGTT GACCGACGTG GCCGCCTGCG
CCGGCGAGGC GCTCAAGGCC AGCGGCTTCC CGGCCCGCTG CCTGGAGCTG GAACTGACCG
AGTCGGTGCT GGCCGAGCGG CCCGACGAGA TCCGCGCCGT GCTGCAGCGG CTGCAGCAGC
TGGGCGTGCG CATGGCGGTG GACGACTTCG GCACCGGCTA TTCGTCCCTG GCGCACCTCA
AGCGCTTTCC CATCGACGTG CTCAAGATCG ATCAGGGCTT CATCCGCGAC ATTCCCCGCA
GCGCCGACGA CATGGCCATC AGCGCCGCCA TCGTTGCCAT GGGGCACAGC CTGGGGCTGT
CGGTGCTGGC CGAGGGGGTG GAGACGCCGC AGCAGCTGGC GTTCCTGCGC GAGCGCGGCT
GCGACGCCTA CCAGGGCTAC CTGTGCAGCC GCCCCCTGCC GGCGGAGGAG TTCGCCCGGC
TGCTGCAGGC GCACAACGGC ATGGCGGGCT GA
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| Protein sequence | |
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