Gene Ajs_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0423 
Symbol 
ID4671173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp429185 
End bp430543 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content71% 
IMG OID639837554 
Producthypothetical protein 
Protein accessionYP_984751 
Protein GI121592855 
COG category[S] Function unknown 
COG ID[COG2733] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCC GCATGCATGC GTCCCCCCTG GAGCCTGGTG CGCAGGCCGC GGCTTCGGCC 
GAGCCGGCCG CGCTTGCGGG CCGCGCCTCC CAGCTGTCCC GGGCCAAGCG CCAGGCCACC
GGCCTGCTGC TGGCAGTGGT CGTCGTCTTT GCGCTGACCT ATTTCTTTCC ACCCAGTCTG
GGCGTGGCCT GCGTGCGCGC CGTGGCGGAG GCTGCCATGG TGGGCGCCCT GGCCGACTGG
TTTGCGGTGT CGGCGCTGTT TCGGCGCATC CCGCTGCCGC TGGTGCAGCG CCACACCGAC
ATCATTGCGC GCAACAAGGA CCGCATCGGC GGCAACCTGG CGGTGTTCGT GCGCGACAAA
TTCCTGGACG CGCCTTCGCT CGTGACCATG ATCCGCCGCC ACGATCCGGC CAACATGCTG
GCGCAGTGGC TCACGGCACC GGCCAACGCG CGCCTGCTGG GCAGGCAGGT GGCCAGGCTG
GCGCTGACCG CGCTGGACAC GGTGGAGGAC GCGAAGATCC AGGCCTTCCT GAGCCAGGCC
GCGCGCACGC TGGTGGGCAA GATCGACCTG TCGCGCTCCA TGGCGTCGGC GCTGGGCGCG
CTCACCTACC AGGGCCGGCA CCAGGCGCTG CTGGACGACC TGCTGGAGCG CCTGGGCGGC
ATGGTGCGAT CCGAGGACAC GCGCGCCTTC GTGGCCGACA CGCTGCTGCA GTGGATCAAG
CGTGAGCATC CGCTCAAGCA GAAGGTGCTG CCTACCGACT GGCTCTCGGG CAAGGGCGCC
TCGGCCATCA CGCACGCCGT GGACACCCTG CTCAAGGCAG TGGCCGAGGA CCCGCAGCAC
GAGCTGCGCG AGGCGCTGGA CGGCGCCGTG CAGCGCCTCA TCGCCCGCCT GCAGACCGAC
CCCGATTGGG CGCGCCGCGG CGACGAGGTG CGCGGCTACC TGCAGAACGA CGAGGTGCTG
GGCCGCTATG TGCGCGATCT GTGGAGCGAC CTGCGCCAGA AGCTGCGCGA CGATCTGATG
AACGAAGACT CGGCATTGTC CGCGCGCGTG GCCGACATGG GGCAGTGGCT GGGGCTGTCG
CTCGCGGGTG ATGCGGCGCT GCGCGTGCGC CTGAACGTGC GCCTGGAACT GTGGGCCGCC
ACCTTTGCGC CCGATGTGGC GCAGTCGGTG GCCGAACACA TCCGCGCTAC GGTGCAGCGC
TGGGACGCGC AGGAGATGGC GCGGCTGGTG GAACTGCACA TCGGCAGCGA CCTGCAGTAC
ATCCGCATCA ACGGCACCGT GGTGGGGGGC TGCATCGGGC TGCTGCTGTT CGCCGTCTCG
CACGCGGGCG CGTTGTGGGC AGCGGTGGCC GGGCCGTGA
 
Protein sequence
MLSRMHASPL EPGAQAAASA EPAALAGRAS QLSRAKRQAT GLLLAVVVVF ALTYFFPPSL 
GVACVRAVAE AAMVGALADW FAVSALFRRI PLPLVQRHTD IIARNKDRIG GNLAVFVRDK
FLDAPSLVTM IRRHDPANML AQWLTAPANA RLLGRQVARL ALTALDTVED AKIQAFLSQA
ARTLVGKIDL SRSMASALGA LTYQGRHQAL LDDLLERLGG MVRSEDTRAF VADTLLQWIK
REHPLKQKVL PTDWLSGKGA SAITHAVDTL LKAVAEDPQH ELREALDGAV QRLIARLQTD
PDWARRGDEV RGYLQNDEVL GRYVRDLWSD LRQKLRDDLM NEDSALSARV ADMGQWLGLS
LAGDAALRVR LNVRLELWAA TFAPDVAQSV AEHIRATVQR WDAQEMARLV ELHIGSDLQY
IRINGTVVGG CIGLLLFAVS HAGALWAAVA GP