Gene Ajs_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0419 
Symbol 
ID4671129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp425437 
End bp426066 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID639837550 
Productcyclic nucleotide-binding protein 
Protein accessionYP_984747 
Protein GI121592851 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCA TTCTCGGCCT GCTCAAGTCC AAAAACCGCA AGTCCGGAGA GGAGAGCACC 
GACTCGGTGT TCTTCACCAC CGCATTTGCC GGCCAGGGCG TGGAGCAATC ACAACTGGTC
CCCTGGGAGG CGCGCGCCGT CGAAGTCGAT GCCAAGCGCC TGCCCCAAAG CCGTGGTGGC
AGGCTGCTGC AGTCGCTGTG GAGCAAGCAC AAGTACATGG CGCACCTGGA CCACGACGCC
GTGGAACGCA TGGAGCGCTT CTTCGAGTTC GCCTCCGTTG CGCCCAACCG CGACCTGATC
CGCCAGGACG AATACGGCAA CTTCATGGTC GTGCTGCTCA CGGGCACCAT CGCCGTGGAC
CGTGTCCAGC CCTGGGGAGA GCAACTGCGC CTGGCCGAGA CGCGGCCCGG CGATATCCTG
GGCGAGATGT CGCTGCTGGA CAGCGGCATC CGTTTTTCGG CGTGCACCAC GCTCACGGAA
TGCGAGATCG CGGTGCTCAG CGCCGAGGCG CTGGATGAGA TGATGGCCCA CGACCCGCAA
CTGGCCGCCA GCCTGGTGGC CCTGCTGGCG CGCAAGCTGT CGCAGCGCCT GCGCGTGGTG
AGCGCGCGTC TGAGTGAAAA TCAACGCTGA
 
Protein sequence
MKGILGLLKS KNRKSGEEST DSVFFTTAFA GQGVEQSQLV PWEARAVEVD AKRLPQSRGG 
RLLQSLWSKH KYMAHLDHDA VERMERFFEF ASVAPNRDLI RQDEYGNFMV VLLTGTIAVD
RVQPWGEQLR LAETRPGDIL GEMSLLDSGI RFSACTTLTE CEIAVLSAEA LDEMMAHDPQ
LAASLVALLA RKLSQRLRVV SARLSENQR