Gene Ajs_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0410 
Symbol 
ID4670882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp416686 
End bp418203 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content68% 
IMG OID639837541 
Productglycosyltransferase 
Protein accessionYP_984738 
Protein GI121592842 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT CCACCGCGCC CCGCGCGCTT TCGTCCCGCC TTCCCTGGAC CCACCCGCTG 
TTCTGGTTCG CGGCCATCTC GCTGGCGCAC GTGGCCATGC GCCTGCTCGC TTCGCCCGCG
CTGAAGTGGG ATGAGGCCGA GCAGATTCTG TGGACCCAGG AGCTGGCACT GGGCTACGGC
CCGCAGCCGC CGCTGTACAC CTGGCTGCAA TGGGCGATGA ACCAGGTGTT CGGCCCCAGC
GTGCTGGCAC TGTCGCTGCT CAAGCATGGG CTGCTGGCAC TGACGTATTC GCTCATGTAC
CTGGCCGGGC GGGAACTGCT GGACGAGCGG GGGGCCTTCT GGGCGTCGGC GAGCATGGTG
CTGATGCCCG CGCTGGGCTG GTATTCGGTC CGCGACCAGA CCCATACCAT CCTCGTCACG
GCGATGGCCT GTGGCGCGTG GTGGCTGCTG CTGCGCATCG TGCGGCGCCC CCGGCCACTG
GACTTTGCCT TGCTGGGGCT GGTGTGCGGC TTCGGCATGC TGGCCAAGTA CAGCTTCGCG
CTGGTGGCGG GCGCCATGCT GCTGGCGGCA CTGTCGGTAC CCGAGGCGCG CCGCGCGCTG
CTGTCGCGCG GCTGGTGGTG GGCGCCCCTG GTGGGCCTGC TGGTCGTGCT GCCGCATGTG
GCATGGCTGC TGTCGCACCT CACCGAGGCG ACGTCCGGCA CCATCAGCAA GATGAACATC
CAGCCTGAAA ACGGGCTGGT CAAGGGCCTG CTGAGGCTGC TGGAGGGCGT GGTCCCCAGC
ACGCTGCTGC TGTGGGCGCT GTTCGCGTTG TGGGCTTTCC GTTCGGCCTG GTGGCAGCGG
CCGCTGGCGC CGGTGTCGCC GCCGATGCAC CGCGTGTTCG TGCGCTACCT GGGCCTGGTG
TTGCTGGCGC TGGCCGGCAT GGTGGTGTTT GCAGGCGTGA GCAACTTCAA GGGCCGCTGG
ATACTTCCAC TGCTGTGTAT GGCACCCCTG GCCGCCTTCT CTGCGCGGCC CGAATTGCAA
CACCATCCCC GTGCACGGCG CTACACGATC GCCGTGGCCA CGATGGCCGT CATCCTGCTG
GTCGCTGCCG GCATACGCCC CTGGTTCAGC GGGCTGCGCG GCGAGGTGGA TGAGCTGAAC
CACCCGTCCA TCGAACTGGC GGACGCCCTG CGCGCCGCGG GCTATGACGG CACCAGCCCC
ATCGTCGCAT CCGACCATAT GCTGGCCGGT ATGCTGCGGG TGCGCTTTCC CGACGCACTG
GTGGACGCCT GTGCGCCGGG CGAAGACGAG ATCCCGACCT GTGTCGCGGA CCATTTGCGC
CGCAGCGTGC AGCGGGGGCA AGGCCTGCTC TTGATTTCAC GCACCGACTA CGTTCCGTCG
AGCTGGTGGG ATCAGGCCCA GGCCCGCATC GCGCCGCGTG CGCTGCAGTC CATCCACCTG
CCCTTCCACA TGGTGCGCGC GGGCACACCC CTGGCCCATT ACGAATACAT CTGGAGCCCA
CGCGGCACAC AACCATGA
 
Protein sequence
MTASTAPRAL SSRLPWTHPL FWFAAISLAH VAMRLLASPA LKWDEAEQIL WTQELALGYG 
PQPPLYTWLQ WAMNQVFGPS VLALSLLKHG LLALTYSLMY LAGRELLDER GAFWASASMV
LMPALGWYSV RDQTHTILVT AMACGAWWLL LRIVRRPRPL DFALLGLVCG FGMLAKYSFA
LVAGAMLLAA LSVPEARRAL LSRGWWWAPL VGLLVVLPHV AWLLSHLTEA TSGTISKMNI
QPENGLVKGL LRLLEGVVPS TLLLWALFAL WAFRSAWWQR PLAPVSPPMH RVFVRYLGLV
LLALAGMVVF AGVSNFKGRW ILPLLCMAPL AAFSARPELQ HHPRARRYTI AVATMAVILL
VAAGIRPWFS GLRGEVDELN HPSIELADAL RAAGYDGTSP IVASDHMLAG MLRVRFPDAL
VDACAPGEDE IPTCVADHLR RSVQRGQGLL LISRTDYVPS SWWDQAQARI APRALQSIHL
PFHMVRAGTP LAHYEYIWSP RGTQP