| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0409 |
|---|
| Symbol | |
|---|
| ID | 4670865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 415679 |
|---|
| End bp | 416689 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639837540 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_984737 |
|---|
| Protein GI | 121592841 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA CCCTGGTCAC CGGCTGCGCC GGCTTCATCG GCATGCATTG CGTGCAGCGG
CTGCTGGAGC GCGGCGAACG GGTGGTGGGC ATCGATAACC TCAATGCCTA CTATGACGTC
GGCCTGAAGC ACGCGCGCCT GGACCGCTTG CACTGTCAGA GCGACTTCAC TTTCGAGCAG
ATCGATGTCG CCGACCGCGA CGCCATGCAT GCGCTGTTTG CGCGGGTGCG TCCCCATCGG
GTGTTGCATC TGGCGGCGCA GGCCGGCGTG CGCTACTCCA TCGACCAACC CGACGATTAC
ACCGACTCCA ATCTGCTGGG CTTCGGCAAC ATCCTGCAGG GCTGCCGCGC ACAGCAGGTG
GAGCACCTGG TGTTTGCCAG CAGCTCCAGC GTGTACGGAG GCAACGCGAA GTTGCCGTTC
TCCGAGCGCG ACGCGGTGGA CCATCCCGTC AGCTACTACG CGGCGACCAA GAAGGCCAAT
GAGGTGATGG CACATGCCTA CGCACACCTG TACGGCATTC CGACCACGGG CCTGCGGTTT
TTCACGGTGT ATGGGCCATG GGGGCGGCCC GACATGGCGC TCTTCAAGTT CACCCGCGCC
ATGCTTGCGG GCGAGACGAT CGACGTCTAC GGCGAAGGTC AGTTGGTGCG TGACTTCACC
TACATCGACG ACATCGTCGA GGGCGTATTG CGCGTACTCG ACAAGCCCGC CACACCCGAC
GCCGCATTCG ATCCACTGTC GCCGTCGCCC GGCACGGGCC TCGCGCCCTA CCGTATCTTC
AATATCGGCA ACAGCGCTCC TACGCTGCTC ATGGACTACA TCCAAGCGCT GGAGGAGGCG
CTGGGGATGG TCGCCCTCAA GCGCATGCGT CCACTACAGC CCGGCGACAT GCACAGCACG
GCGGCAGACA TGTCGGCGCT GGCTTCCTGG GTCGGCTTTG CCCCCCATAC GCCCGTGCGG
GACGGCGTGG CGCGCTTCGT CCACTGGTAC AAGGATTTCT ACCCATCATG A
|
|---|
| Protein sequence | MSVTLVTGCA GFIGMHCVQR LLERGERVVG IDNLNAYYDV GLKHARLDRL HCQSDFTFEQ
IDVADRDAMH ALFARVRPHR VLHLAAQAGV RYSIDQPDDY TDSNLLGFGN ILQGCRAQQV
EHLVFASSSS VYGGNAKLPF SERDAVDHPV SYYAATKKAN EVMAHAYAHL YGIPTTGLRF
FTVYGPWGRP DMALFKFTRA MLAGETIDVY GEGQLVRDFT YIDDIVEGVL RVLDKPATPD
AAFDPLSPSP GTGLAPYRIF NIGNSAPTLL MDYIQALEEA LGMVALKRMR PLQPGDMHST
AADMSALASW VGFAPHTPVR DGVARFVHWY KDFYPS
|
|---|
| |