Gene Ajs_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0404 
Symbol 
ID4670798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp411393 
End bp411797 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content60% 
IMG OID639837534 
Product30S ribosomal protein S11 
Protein accessionYP_984732 
Protein GI121592836 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAT CTCCTGCCAA TAATGCCGCG CAACGTGTGC GCAAGAAGGT TCGCAAGAAC 
ATTTCGGACG GCATCGCCCA CGTGCACGCC TCCTTCAACA ACACGATCAT TACGATCACC
GATCGCCAAG GCAATGCTCT GTCCTGGGCG TCTTCTGGTG GCCAGGGCTT CAAGGGTTCG
CGCAAGTCAA CTCCTTTTGC TGCTCAGGTG GCATCGGAAG TGGCCGGTCG CGCAGCCATT
GAGCAAGGCA TCAAGAACCT CGATGTCGAA ATCAAGGGTC CCGGTCCTGG CCGCGAATCC
TCGGTGCGCG CGCTGGGCGC TCTCGGCATC CGCATCACCT CCATCTCGGA TGTGACGCCT
GTGCCCCACA ACGGTTGCCG CCCCCAGAAA CGCCGCCGTA TTTAA
 
Protein sequence
MAKSPANNAA QRVRKKVRKN ISDGIAHVHA SFNNTIITIT DRQGNALSWA SSGGQGFKGS 
RKSTPFAAQV ASEVAGRAAI EQGIKNLDVE IKGPGPGRES SVRALGALGI RITSISDVTP
VPHNGCRPQK RRRI