Gene Ajs_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0384 
Symbol 
ID4671286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp397171 
End bp398244 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content67% 
IMG OID639837514 
ProductABC transporter related 
Protein accessionYP_984712 
Protein GI121592816 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGG CGTTGGACAG CATCAGCAAG AAAGTCGGGG CGCAGACCTG GCTGTATGAC 
ATGAGCCTGG CGCTGCAAAG CAATGCCGTG ACGGTATTGC TGGGCGCGAC CCAGGCGGGC
AAGACGAGCC TGATGCGCAT CATGGCGGGG CTGGACGTGC CCACGCAGGG GCGCGTGCTG
GTGGATGGCA AGGATGTGAC GGGCACCCCT GTGCGCGAGC GCAACGTGGC CATGGTGTAC
CAGCAGTTCA TCAACTACCC CTCGATGAAG GTGTTTGACA ACATCGCCTC GCCCCTGAAG
CTGCGCGGCG AGAAAAACAT CGATGCCCGC GTTCGCGAAC TGGCCAGCCG CCTGCACATC
GAGATGTTTC TGGACCGCCT GCCCGCCGAG CTGTCGGGCG GCCAGCAGCA GCGCGTGGCA
TTGGCCCGTG CGCTGGCCAA GGGCGCGCCG CTGATGCTGC TGGACGAACC CCTGGTGAAC
CTGGACTACA AGCTGCGCGA GGAACTGCGC GAGGAGCTGA CCCAGCTGTT TGCTGCCGGG
CAATCCACCG TGGTGTATGC CACCACCGAG CCGGGCGAGG CCCTGCTGCT GGGCGGCTAC
ACCGCTGTGA TGCACGAAGG CCGCCTGCTG CAATACGGCC CCACGGCCGA GGTGTTCCAT
GCACCCAATT CGCTGAGCGT GGCGCGCGCT TTCAGCGACC CACCGATGAA CCTGATGACC
GCCACCCGCC AGGACGGTGG CGTGCGGCTG AGCGACGGCA CCGTGCTGCC ACTGCCTTTG
CCCCCCACGA CCAGCGCTTC GCTCACCGTG GGCGTGCGCG CCAGTGCGCT GCGCGTGCAG
GCCCGTCCGG GCGATGTGGA AGTGCAGGGC GTGGTGGAGC TGGCCGAGAT TTCGGGCTCT
GACACCTTTG TGCACGTAGA CACGCCCTGG GGCGAGCTGG TGGCCCAACT CACCGGTGTG
CATTACTTTG AACTGGGCGC ACAGGTTCGC CTGCACCTGA ACCCGGCCCA GGCCTATGTG
TTCGGTGCGG ACGAGGCTCT GGTGCTGGCC CCCCAGCGCG CGGGAGGGCG CTGA
 
Protein sequence
MQLALDSISK KVGAQTWLYD MSLALQSNAV TVLLGATQAG KTSLMRIMAG LDVPTQGRVL 
VDGKDVTGTP VRERNVAMVY QQFINYPSMK VFDNIASPLK LRGEKNIDAR VRELASRLHI
EMFLDRLPAE LSGGQQQRVA LARALAKGAP LMLLDEPLVN LDYKLREELR EELTQLFAAG
QSTVVYATTE PGEALLLGGY TAVMHEGRLL QYGPTAEVFH APNSLSVARA FSDPPMNLMT
ATRQDGGVRL SDGTVLPLPL PPTTSASLTV GVRASALRVQ ARPGDVEVQG VVELAEISGS
DTFVHVDTPW GELVAQLTGV HYFELGAQVR LHLNPAQAYV FGADEALVLA PQRAGGR