Gene Ajs_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0374 
Symbol 
ID4671197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp384698 
End bp385798 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content72% 
IMG OID639837505 
ProductS-adenosylmethionine--tRNA-ribosyltransferase- isomerase 
Protein accessionYP_984703 
Protein GI121592807 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTG CCTCCACCGC ACCCCGCACC TTCACCCTGA GCGACTTCGA CTTCGAGCTG 
CCCGAACTGC TCATCGCCCA GCACCCGGCC CCCCAGCGCA GCGGCTCGCG CCTGCTGGAC
GGGCGCACCG CCCCGCCCAC CGACCGCATC TTCCGCGAAC TGCCCGACCT GCTGCAACCG
GGCGACCTGC TGGTGTTCAA CGACACACGC GTGGTCAAGG CCCGCGTGTT CGGCGAGAAG
GCCAGCGGCG GCAAGCTGGA GCTGTTGATC GAGCGCGTGC TCACCGGCAA CGAGGTCGTG
GCGCACATGA AGGTCAGCAA AAAGCCGCTG CCCGGCGCCA CGCTCCACCT GGCCGGCGGC
GCGGCCGCGG GCGGGTTCGA CGCCACGCTG CTCGGCCGCT ACCCGGACGC GGACGGCCCG
CTGTTTCGCC TGGCCCTGCG CGGCCCCGCG GGCGAGAGCC CCTGGGAGCT CATGGAGCGC
CACGGCCACC TGCCGCTGCC GCCCTACATC GAGCGCCAGC AGGCCGGCGG CAACGACCCC
CATGCCGGCG AGGACAGCGA GCGCTACCAG ACCGTGTTCG CGCGCGCGCC CGGCGCGGTG
GCCGCGCCCA CGGCCGCGCT GCACTTCGAC GATGCCGTAC TGGCCCGCCT GGCCGAACGC
GGCATCGAGC GCGCCAGCGT CACGCTGCAC GTGGGCGCGG GCACCTTCCA GCCCGTGAAG
ACCGAGAACC TGGCCGAGCA CCGCATGCAC AGCGAGTGGT ACGAGGTACC GCTGGCCACG
CTGGCGGCGC TGGAGCGCTG CCGCCAGCGC GGCGGCCGCG TGGTGGCCGT GGGCACGACC
ACGGTGCGCA CGCTGGAATC CTGGGCCGCG AGCGGCCAGG CCACGGGCGA CACCAGCATC
TTCATTACGC CCGGCTTTTC ATTCCAGGTG GTCGACCTGC TGCTCACCAA CTTCCACCTG
CCCAAGAGCA CGCTGATGAT GCTGGTGAGC GCCTTTGCGG GCTACGAGCA CATCATGCAC
CTGTACCGCC ACGCGGTCGC GCAGCGCTAC CGCTTCTTCA GCTACGGCGA CTGCATGCTG
CTGGAGCGGC CCCGCGCATG A
 
Protein sequence
MSSASTAPRT FTLSDFDFEL PELLIAQHPA PQRSGSRLLD GRTAPPTDRI FRELPDLLQP 
GDLLVFNDTR VVKARVFGEK ASGGKLELLI ERVLTGNEVV AHMKVSKKPL PGATLHLAGG
AAAGGFDATL LGRYPDADGP LFRLALRGPA GESPWELMER HGHLPLPPYI ERQQAGGNDP
HAGEDSERYQ TVFARAPGAV AAPTAALHFD DAVLARLAER GIERASVTLH VGAGTFQPVK
TENLAEHRMH SEWYEVPLAT LAALERCRQR GGRVVAVGTT TVRTLESWAA SGQATGDTSI
FITPGFSFQV VDLLLTNFHL PKSTLMMLVS AFAGYEHIMH LYRHAVAQRY RFFSYGDCML
LERPRA