| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0371 |
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| Symbol | |
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| ID | 4670903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 380373 |
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| End bp | 383045 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837502 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_984700 |
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| Protein GI | 121592804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGAGA GACCGGATAC GCAGGCCGAG CGTTTTCGCA GGGAGTGGTG GTTGCTGGCG
GGCCTGTGGC TGGCGCTGGG GGCGCTGATT GCGGTCGTGC TGATCCTGGA GCGGCGGGAC
ACCGAGGCAC GCGAGCGCCA GCAGGTCGCG CACCAGGTGC ATATCGTCCA TGAGAACCTG
GAGCGCCAAC TGCATGCCGT GAACCAGGCG CTGGGGGATA TTGTTGCGAA CCTGGCGCAG
TGGCGCGCGC GCCCTGAAGG CGCCTTGCCA TTCAACGAGC GGCTGCGGGC CTTCAGCGAC
GCCATGACCG GCGTGCGCAC GCTGACCGTG CTGGATGCCG AGGGTACGGT GGTCGCCTCC
AGCCGCGCCG AACTGCTCGG GGAGAACTTT GCCTACCGCG ATTACTTCCA GTCGGCGCGG
CGACTGGCAA GCCGCGAGCA GCCCTCGCTG ATCGTCAGTG CGCCCATGCG CACGGTGTTG
GGTATCTGGG CCATCACGTT GTCGCGCCCG GTGGTGGCGG AAGATGGGCT GCCCGGCGGC
GTGGTCGCGG CGACGCTGGA CCCCGACGAG TTCAAGACTT TGCTGGATTC CGTGCGCTAC
GCCCCCGACG TGGAGAGCAC CCTGGTGCAC GGCGACGGCG TGCGCTTCCT GCGCGTGCCC
GAACGGGCGG GGCTTCTGGG CGCCACGCTG GCGCAGCCCG GCACGCTCTT TCAGGCGCAC
CTGGACAGCG GGCGGATGGA AAGCCTCTTC GTCGGCGCGA TGGAGCCGGA CCCGGCCGAG
CGGCTGGTGG CGCTGCGCAC CATCTTTCCG GCGCACCTGC ACATGGACAA GCCGTTGGTT
GCGGCCGTCG CGCGGGACTG GAGCCAGGTG TTCGCCGCCT GGCGCGCGCG CGCCTGGACG
CTGGGTGTGG CATGGCTGCT GACGGGGGTT GCCATTGGGC TGGGCCTGGG CTTCATGCAG
CGCCGGCGCC GCCAGCTGTG GCGCCGCGAG CAGGCGCTGG CTGCCCAGGA AGCCGCCTTG
CAGGCCCGCT GGCAGGCGGT GCTGCACGCT ACCCAGCAGG GCGTGTGGGA CTGGGACGTG
GCCGCGGGCA CGGTGTATTT CTCGCCGGTA TGGAAGACCA TGCTCGGCTA CGCAGAAGGC
GACATCGGCG ACAGCCTGCA GGAATGGGAA AGCCGCGTGC ATCCCGACGA CCTAGCGCGC
GTGCAGGCCG ACGTGGCGCG GCACCTGGCG GGTGAAACGC CGGTGTATGA GAACGTGCAC
CGCCTGCGCT GCGAGGACGG CAGCTACAAA TGGGTGCAGG ACCGCGGCCA GGTGACCGCG
CGCGACGCCA GCGGCCGACC CACCCGCCTC ATCGGCACCC ACACGGACGT GACCGCGCAG
CGCCAGCACC AGGAGACGCT GGACCGCCTG GCCGAGAACG TGCCCGGCGC GCTGTACCAA
TACCAGCGCG AGCCCGACGG GCGCAGCCAC TTCCCGTACG TCAGCTCCGG GGTGCAGGAC
ATCTACGGGC TTCCCCCGCA GGCCCTGTGC GTGGACGCCG AGCAGGTCTT CGCGCGCATC
CACCCCGACG ACCTGCAGGC GCTGCGCGAG AGCGTGCTGG CATCCGCGCA GACCCTGGAG
CTGTGGCGCA CCGAATACCG TGTGCTCGTG CCCGGGGAGC GCGAGCGCTG GGTCAGCGGC
CAGGCACGGC CCGCGCGCAC GGCCTCGGGC GCCGTGCTGT GGCATGGCTA TATCCACGAC
GTGACGCTGG CCAAGCAGCA GGCGCTGCAG CAGCAGGAGA CCGAGCGCCT GCTCACGCAT
CTGATGCAGG AGATGCCCAT CGGGCTGTGC ATGATCAATG CCGCGGGCGT GATCTATTTT
CGCAACCGGC GCTTCCAGGA CCTGTTCGGC TACACCGAAG CCGAGGTGCC CACGCTGGGG
CAGTGGTGGC CGCGCGCCTA TCCCGATCCG CACTACCGCG AACAGGTCAT CGCCGCGTGG
AACGCAGACC TGGCGCAGGC AGGCGCGCAG GGGGGCGAGA TCGCGGACAG GGAATACCGC
GTCACCGACC GCGACGGCAG GCTGCATACG ATGACCATCG GCGGGCTGGC TTTTGGCGAC
CATTGCATGG CCACGTTCGT GGACGTGACC GAGCAGCGCG CGCAACATGA ACTGCTGCGC
AAGCTGGCCT TCATGGACGG GCTGACGGGC CTGGCCAATC GCCGCCAGTT GGACCGCACC
CTCAAGGCCG AATGGCGGCG CTGCCGGCGC AGCGGCCAGC CCCTGTCCGT GGTGATGGTG
GACATCGACC ATTTCAAGCA GTTCAACGAC CTGTATGGCC ACCAGCAGGG CGATGATTGC
CTGCGCGCCG TGGCCGCCGC GCTGCGCGGC GGCCTGGGGC GGTCGCACGA CCTCGTGGCT
CGCTACGGCG GCGAAGAATT CGTCTGCCTG TTGCCCGAGT GCGACCTGGA CGGCGCGCGC
GCCAAGGCGC AGGCGCTCTG CCGGGCCGTG CATGCGCGGC AGATGGAACA CCGCGGCTCG
CCGGTTGCGC CCGTGGTCAC GGTGAGTGCC GGGGTGGCCT GTGTGGTGCC CGGCGCCGAA
GACACCCCCG AACAGTTGCT GGCGCGCGCG GATGCGAACC TGTACCGCGC CAAGGCGGCA
GGCCGCAACC GGGTGCATGA TGGAATGGAT TAG
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| Protein sequence | MRERPDTQAE RFRREWWLLA GLWLALGALI AVVLILERRD TEARERQQVA HQVHIVHENL
ERQLHAVNQA LGDIVANLAQ WRARPEGALP FNERLRAFSD AMTGVRTLTV LDAEGTVVAS
SRAELLGENF AYRDYFQSAR RLASREQPSL IVSAPMRTVL GIWAITLSRP VVAEDGLPGG
VVAATLDPDE FKTLLDSVRY APDVESTLVH GDGVRFLRVP ERAGLLGATL AQPGTLFQAH
LDSGRMESLF VGAMEPDPAE RLVALRTIFP AHLHMDKPLV AAVARDWSQV FAAWRARAWT
LGVAWLLTGV AIGLGLGFMQ RRRRQLWRRE QALAAQEAAL QARWQAVLHA TQQGVWDWDV
AAGTVYFSPV WKTMLGYAEG DIGDSLQEWE SRVHPDDLAR VQADVARHLA GETPVYENVH
RLRCEDGSYK WVQDRGQVTA RDASGRPTRL IGTHTDVTAQ RQHQETLDRL AENVPGALYQ
YQREPDGRSH FPYVSSGVQD IYGLPPQALC VDAEQVFARI HPDDLQALRE SVLASAQTLE
LWRTEYRVLV PGERERWVSG QARPARTASG AVLWHGYIHD VTLAKQQALQ QQETERLLTH
LMQEMPIGLC MINAAGVIYF RNRRFQDLFG YTEAEVPTLG QWWPRAYPDP HYREQVIAAW
NADLAQAGAQ GGEIADREYR VTDRDGRLHT MTIGGLAFGD HCMATFVDVT EQRAQHELLR
KLAFMDGLTG LANRRQLDRT LKAEWRRCRR SGQPLSVVMV DIDHFKQFND LYGHQQGDDC
LRAVAAALRG GLGRSHDLVA RYGGEEFVCL LPECDLDGAR AKAQALCRAV HARQMEHRGS
PVAPVVTVSA GVACVVPGAE DTPEQLLARA DANLYRAKAA GRNRVHDGMD
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