Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0370 |
Symbol | trpC |
ID | 4670926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 379434 |
End bp | 380234 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837501 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_984699 |
Protein GI | 121592803 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACA TCCTGAAGAA AATCTGCGAC GTGAAGGTCG AGGAAGTGGC CGCCGCGCAA AAGCGCGTGT CCTTCACCGA CATGCGCCGC GACGCCGAGA GCCGCGTGCT CACGCGCGAC TTCGTGGGCG CGCTGCGCGC CAAGATCGAC CAGGGCCAGG CCGGCGTGAT CGCCGAAATC AAGAAGGCCA GCCCCAGCAA GGGCGTGATC CGCGAGGATT TCATCCCGGC CGACATCGCG CAAAGCTACG CCGAGGGCGA CGGCAAGGTC GGCGCGGCCT GCCTGTCGGT GCTGACCGAC CGCCAGTTCT TCCAGGGCCA GCCCGATTAC CTGAAGCAGG CACGCGCCAG CTGCCCGCTG CCGGTGCTGC GCAAGGACTT CATGATCGAT CCGTACCAGA TCTACGAGTC GCGCGCTTTT GGAGCCGACT GTGTGCTGCT GATCGCCGCC TGCCTTGAGG ATGGCCTGAT GGCCGAGATG GAGCAGATCG CCCGCAGCCT GGACATGGCC GTGCTGGTGG AGGTGCACGA CGGCGCCGAG CTGGAGCGCG CGCTGCGCCT GCAGACGCCG CTCGTGGGCA TCAACAACCG CAACCTGCGC ACCTTCGAGG TCAGCCTGCA GACCACGCTG GACCTGAAGA AGGAAGTGCC TGCCGACCGC CTGCTGGTGG CCGAGTCCGG CATCCTTGCG CCGGTGGATG TGCACACGCT GCGCGATGCC GGCGTGAATG CGTTCCTGGT GGGCGAGGCC TTCATGCGCG CGCCCGACCC GGGGCGGGCG CTGGCCCAGC TGTTCGCCTG A
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Protein sequence | MSDILKKICD VKVEEVAAAQ KRVSFTDMRR DAESRVLTRD FVGALRAKID QGQAGVIAEI KKASPSKGVI REDFIPADIA QSYAEGDGKV GAACLSVLTD RQFFQGQPDY LKQARASCPL PVLRKDFMID PYQIYESRAF GADCVLLIAA CLEDGLMAEM EQIARSLDMA VLVEVHDGAE LERALRLQTP LVGINNRNLR TFEVSLQTTL DLKKEVPADR LLVAESGILA PVDVHTLRDA GVNAFLVGEA FMRAPDPGRA LAQLFA
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