| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0361 |
|---|
| Symbol | |
|---|
| ID | 4671598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 370517 |
|---|
| End bp | 371197 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639837492 |
|---|
| Product | ribulose-5-phosphate 3-epimerase |
|---|
| Protein accession | YP_984690 |
|---|
| Protein GI | 121592794 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA CCTACCGCAT CGCCCCTTCT ATCCTGTCCG CCGACTTTGC CCGCCTGGGT
GAGGAAGTGC GCAACGTCAT CGCCGCCGGC GCCGACTGGA TCCACTTTGA CGTGATGGAC
AACCACTATG TGCCCAACCT CACCTTCGGC CCCATGGTGT GCCAAGCCCT CAAGCCCCAT
GCCGTGACGC CCGCAGGGCA CGCCGTCCCG ATCGACGTGC ACTTGATGGT GCAGCCCGTG
GACGAACTGG CCACGGCGTT TGCCAAGGCG GGGGCGGACC TCATCAGCTT CCACCCCGAT
GCCTCGGCGC ACGTGCACCG CAGCATTCAG AACATCCGCG CGCAGGGCTG CAAGGCGGGC
CTGACCTTCA ACCCCGCCAT GCCGCTTGAC GTGCTGGACT GGGTGATCGA GGACATCGAC
CTGATCCTGT TGATGAGCGT GAACCCCGGC TTTGGCGGAC AGAGCTTCAT CGACAGCACG
CTGCGCAAGA TCGAAGCGGC CCGCAGGCGC ATCGAGGCCT CGGGCAAGGA CATCCGCCTG
GAGGTGGACG GTGGCATCAA GGCCGACAAC ATCCGCCGGG TGGCGGATGC GGGCGCGGAC
ACGTTCGTTG CAGGCAGCGC CATCTTCGGC AAGAGCGACT ACAAGGCGGT GATCGACGCC
ATGCGCGCCG AACTGGCGTG A
|
|---|
| Protein sequence | MSRTYRIAPS ILSADFARLG EEVRNVIAAG ADWIHFDVMD NHYVPNLTFG PMVCQALKPH
AVTPAGHAVP IDVHLMVQPV DELATAFAKA GADLISFHPD ASAHVHRSIQ NIRAQGCKAG
LTFNPAMPLD VLDWVIEDID LILLMSVNPG FGGQSFIDST LRKIEAARRR IEASGKDIRL
EVDGGIKADN IRRVADAGAD TFVAGSAIFG KSDYKAVIDA MRAELA
|
|---|
| |