| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0329 |
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| Symbol | |
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| ID | 4673971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 340974 |
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| End bp | 342392 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837460 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_984658 |
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| Protein GI | 121592762 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.378923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC ATACCCTGAC CGGCGCCATC GCGCTGGCGG GGCTGTTGAG CGCCTGCTCC
ATGGTCCCGA AGCACCAAAC CCCCGCCGCC CCCGTGCCTG CCGACTGGCC GCAGCCCACA
GCGGGCGGCA CCCAGGCGGC AGCGCCGGTG AACTGGCAGC AGTTCTTTGG CAACGCGCAG
CTGCGCACGC TGATCGAGCT GACGCTGGAA AACAACCGCG ACCTGCGCGC CGCCGCGCTG
AACGTGCAGG CCTTCCAGGC GCTGTACCGC ATCCAGAAGG CTGACAGCCT GCCCACCATA
GGCGCCGAGG CTGGCGGCTC GCGCCAGCGC GTGCCCGCCG ACGTGGCTGG CGCGCCGCAG
GCGGTCACCG CCAGCACCTA CAGCGTGGGG CTGGGCATGG CCGCGTACGA GCTAGACCTG
TTCGGCCGCG TGCAAAGCCT GAATGATCAG GCGCTGCAAA ACTACCTGGC GATGGACAGC
ACCCGCAAGG CCACGCAGCT GAGCCTGGTG GCCGCCACCG CCAGCGCCTG GATGACCTGG
CAGGCCGATC AGCAGCTGCT GGACGTGGTC ACGCGCACAC TGGCCGCCAA TGAGCGGGCG
CTGGACTTGA TCGTGGCGCA GGTGGACAAC GGCATTGCCA CCGACCTGCA GCGCCACCAG
GCGCAAACCG CGGTGGACAG CGCCCGCGCC CAGCACGCCC AGTTCACCCG GGCGGTGGAG
CAAGACCTGA ACGCGCTGCA GGCCCTGGTG GGCGCACCGC TGCCCCCATC GGTACTGCAG
ACCCGGGTGG GCATTGCAGA CTGGCAACTG GCGCAGCTGC CCGTGGGCCT GCCGTCGCAG
GTGCTGGCCC AGCGCCCTGA CATCCTGGCG GCCGAGCAGC AACTGCGGGC CGCCAACGCC
AACATCGGCG CTGCGCGCGC GGCCTTCTTT CCGCGCATCG CCCTGACCGC CAGCGTGGGC
ACGGCCAGCA GCGACCTGTC GGGCCTGTTC AACGGCGGCT CGGGCGCCTG GAGCTTTGCG
CCGCAAATCA GCATCCCGCT GTTCAACGCG GGCCGGCTGG CGGCCAACCT GGACTACGCC
ACGCTGCAAA AAGACATGCG TGTGGCGCAG TACGAAAAAG CCATCCAGAC GGCGTTCCGC
GAAGTGGCCG ACGGCCTGTC GGCACGCCAC ACTTTTGTGC GCCAGCTGCA GGCTAACCAA
AGCCTGGTGC AGGCCTCGGG CAAATACCTG GATCTGGCCC AGCTGCGCTA CGACGCCGGC
GTGGAGGGCT ACCTGACCGT GATCGACGCG CAGCGCAACC TGCTGAGCGC CGAGCTGGGC
GCGGTGCAGA CCGGGTTGCA GCAGGCGTTG AGCGAAGTGC AGCTGTTCAA GGCCCTGGGC
GGCGGCATGC TGGTAGCTGA TGCGCAGCCC GGCGCCTGA
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| Protein sequence | MKLHTLTGAI ALAGLLSACS MVPKHQTPAA PVPADWPQPT AGGTQAAAPV NWQQFFGNAQ
LRTLIELTLE NNRDLRAAAL NVQAFQALYR IQKADSLPTI GAEAGGSRQR VPADVAGAPQ
AVTASTYSVG LGMAAYELDL FGRVQSLNDQ ALQNYLAMDS TRKATQLSLV AATASAWMTW
QADQQLLDVV TRTLAANERA LDLIVAQVDN GIATDLQRHQ AQTAVDSARA QHAQFTRAVE
QDLNALQALV GAPLPPSVLQ TRVGIADWQL AQLPVGLPSQ VLAQRPDILA AEQQLRAANA
NIGAARAAFF PRIALTASVG TASSDLSGLF NGGSGAWSFA PQISIPLFNA GRLAANLDYA
TLQKDMRVAQ YEKAIQTAFR EVADGLSARH TFVRQLQANQ SLVQASGKYL DLAQLRYDAG
VEGYLTVIDA QRNLLSAELG AVQTGLQQAL SEVQLFKALG GGMLVADAQP GA
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