| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0324 |
|---|
| Symbol | |
|---|
| ID | 4673674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 333098 |
|---|
| End bp | 333709 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639837454 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_984653 |
|---|
| Protein GI | 121592757 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.720161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGC GTACCAAGGC AGATGCGGCT GCCACGCGCA ATGGCCTGCT GGATGCGGCT
GAGCATGTTT TTTACGAGAA GGGCGTTTCT CGCGCGTCCT TGGCCGATAT TGCCACCGTG
GCCGGCACCA CCCGTGGCGC CATTTATTGG CACTTCAAGG ACAAGGCAGA TTTGTTCAAT
GCCATGCTGG ATCGCGTCAC GCATCCGCTG ATGCAGGCCA TTGAAGACAC CCAAGGCATG
GCGCACCTGG CGCGTTTGCG CGGCCTGGTG CAGGGCGTGC AAGGCGCCGT CGCGCACGAT
GAGCGCATGC GCCGTGTTTT CGAGATCGCG CTGTACCGGG TTGAATACGT CGAAGACTTT
GAGGCCGTGA AACGCCATCA TGTCGCAGGG TGCGCGGCTT TCCAGGCGCA GATTGCCCGG
GAGCTGGGCC TGGCCGCCGC GGCGCAAGGC ATCGACCTGC CCCTATCGGC CCCGGTTGCG
GCCATGGGCG TGCAGGCGCT GTTTGATGGC TTGCTGCAGT CGTGGCTGCT CAACGATGCC
AATTTCGACC TGGAAGCCGC CAGCCGCCAG ACCATCGACG CATATCTGCG CGGTCTGGGC
TTTTGCCTGT GA
|
|---|
| Protein sequence | MARRTKADAA ATRNGLLDAA EHVFYEKGVS RASLADIATV AGTTRGAIYW HFKDKADLFN
AMLDRVTHPL MQAIEDTQGM AHLARLRGLV QGVQGAVAHD ERMRRVFEIA LYRVEYVEDF
EAVKRHHVAG CAAFQAQIAR ELGLAAAAQG IDLPLSAPVA AMGVQALFDG LLQSWLLNDA
NFDLEAASRQ TIDAYLRGLG FCL
|
|---|
| |