| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0321 |
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| Symbol | |
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| ID | 4673650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 326993 |
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| End bp | 328435 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837452 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_984651 |
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| Protein GI | 121592755 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.877077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAGC ACAACCTGCA CAGCACGCGC CCGGCGCGTG CCCTGTCCAC CCTGACGGCA
GCGGTACTGC TGGCCGGATG CAGCTTCATC CCGCACTACG AGCGGCCCGC GGCGCCAGTG
CCGCCAACCT ACCCGCTGGC AAGTGCCAGC GCTGCAGCCC CCCAGAGCGC CGCCAGCATC
GACTGGAAGG ACTACTTCAC CGACCCGCGC CTGCAGCGGC TCATCGGCAT CGCCCTGGAC
AACAACCGCG ATCTGCGCAT GGCCATGCTC AACGTCGAGC AGGCGCGGGC GCAGTTCCAG
ATCCAGCGGG CCAACCAGTT CCCCACGGTC AACGCCATCG CCAGCGGCAC GCGCCAGCCC
AGCGTGACCA CGGGCAGCTA CGCCAACCAG TTCCAGGTGG GCTTGGGCAT CTCGGCCTGG
GAGATCGACT TCTTCGGGCG CGTGGCCGCC CTCAAGGAGC AGGCCCTGGC CCAGTACCTG
GCCACGGACG AGGCCCGCAA ATCGGCACAG ATCAGTCTGG TGGCGGCCGT GGCCTCGGGC
TGGCTCACAC TGATGGCCGA CGAGGAGCTG CTCGACATCT CGCGTCGCAC GCTGGAAACG
CGCGATGAGT CGGTCAAGCT CACACGCCTG CGCCTGGAGA ACGGCGTGAG CTCCGAGCTC
GACAACCGCC AGGCCGAGAG CCTGGCCCAG GCCGCACGCG CCACCTATGC GCAGCAGCAG
CGCCAGCGCA TGCTCGATGA AAACGCGCTG GTCCTGCTAC TGGGCCAGCC GCTGCCCGAC
GACATCCGTG CCAGCCTGCC CTCCTCGCGC CTGGCCGACG CCACGCCCAT GCAGGCGCTG
CCCGCGGGCC TGCCTTCCGA CCTGCTGGTG CGCCGCCCGG ACGTGCGCAT GGCCGAGCAG
CAGTTGATCG GCGCCAACGC CAACATCGGC GCGGCGCGCG CGGCGTTTTT CCCGCGCATC
TCGCTCACCG CCCAGTTCGG CACCGTGAGC GATGAGCTGT CGGGGCTGTT CAAGAGCGGC
TCGTGGGCGT TCTCTCTGGC GCCGCAGCTG GCCCTGCCGA TCTTCGATGC CGGCCGCAAC
CAGGCGGGGT TGGAGTCCGC GCGCGCGGGC CGCGAAATCG CCGTGGCCCA GTACGAGAAG
TCCATCCAGA CCGCGTTCCG CGAGGTGTCC GACGCCCTGG CCGGCCAGGC CACGCTGCAG
GAGCAGGTCG ACGCCCAGCG TGCCCAGGCG CAGGCGGATG CCAAACGCTT CGAGCTGTCG
GACCTGCGCT ATCGCAACGG CGTGGCCAGC TACCTGGACC TGCTGGATGC GCAGCGCTCG
CTGTTCGCCA CCCAGCAGTC ACTGGTGGTG ACACGCCTGC AGCAACTGCA GAACCAGGTG
ACGCTCTACA AGGTGCTGGG CGGCGGCTGG ACCGCTCCCG CCGAAGAGAC CCCACGCTCC
TGA
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| Protein sequence | MHKHNLHSTR PARALSTLTA AVLLAGCSFI PHYERPAAPV PPTYPLASAS AAAPQSAASI
DWKDYFTDPR LQRLIGIALD NNRDLRMAML NVEQARAQFQ IQRANQFPTV NAIASGTRQP
SVTTGSYANQ FQVGLGISAW EIDFFGRVAA LKEQALAQYL ATDEARKSAQ ISLVAAVASG
WLTLMADEEL LDISRRTLET RDESVKLTRL RLENGVSSEL DNRQAESLAQ AARATYAQQQ
RQRMLDENAL VLLLGQPLPD DIRASLPSSR LADATPMQAL PAGLPSDLLV RRPDVRMAEQ
QLIGANANIG AARAAFFPRI SLTAQFGTVS DELSGLFKSG SWAFSLAPQL ALPIFDAGRN
QAGLESARAG REIAVAQYEK SIQTAFREVS DALAGQATLQ EQVDAQRAQA QADAKRFELS
DLRYRNGVAS YLDLLDAQRS LFATQQSLVV TRLQQLQNQV TLYKVLGGGW TAPAEETPRS
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