| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0316 |
|---|
| Symbol | |
|---|
| ID | 4673588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 323394 |
|---|
| End bp | 323999 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639837447 |
|---|
| Product | LemA family protein |
|---|
| Protein accession | YP_984646 |
|---|
| Protein GI | 121592750 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1704] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.529151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAC TCATCGCCAT GCTTTCCGCC GTGCTGGCCC TCTCGGGCTG CGGCTACAAC
GACTTCCAGC GCCTGGACGA GCAGTCCAAG GCCGCGTGGA GCGAAGTGCT CAACCAGTAC
CAGCGCCGCG CCGACCTGGT GCCCAACATC GTGGCCACCG TCAAGGGCGA GGCGGCGTTC
GAGCAGGAGA CGCTGACCAA GGTGATCGAG GCGCGCGCCA AGGCCACCTC GATCCAGGTG
ACGCCCGAAA CCCTCAACAA CCCCGAGGCG TTCAACAAGT TCCAGCAGGC GCAGGGCGAG
CTGTCCAGCG CGCTGTCGCG CCTGATGGTG GTGGCCGAGC GTTACCCGCA GCTGCAGGCC
AACCAGGCCT TCCGCGACCT GCGCGTGACG CTGGAGGGCA CCGAGAACCG CATCACCGTG
GCACGCAACC GCTACATCCA GACCGTGCAG GAGTACAACG TGCTCGCACG CAGCTTCCCC
ACCAACCTCA CGGCCATGGT GTTCGGCTAT GAACCCAAGC CCAGCTTCAC GGTGGCGAAC
GAGGCCGAGA TCTCTGCGCC GCCCAAGGTG GATTTCTCCA GCCCCGCACC CGCCTCCAAG
CCCTGA
|
|---|
| Protein sequence | MKRLIAMLSA VLALSGCGYN DFQRLDEQSK AAWSEVLNQY QRRADLVPNI VATVKGEAAF
EQETLTKVIE ARAKATSIQV TPETLNNPEA FNKFQQAQGE LSSALSRLMV VAERYPQLQA
NQAFRDLRVT LEGTENRITV ARNRYIQTVQ EYNVLARSFP TNLTAMVFGY EPKPSFTVAN
EAEISAPPKV DFSSPAPASK P
|
|---|
| |