Gene Ajs_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0315 
Symbol 
ID4673560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp322470 
End bp323372 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID639837446 
Producthypothetical protein 
Protein accessionYP_984645 
Protein GI121592749 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.929741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.551867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTAG CGCTTGCCCT TCAAGCGCTG ATAGCTATAT TTCTTGTAGC TATCGGAGCC 
CTCCCCGCCA CCGCGCAGCC GCTGCGCGCG GTGCCTGCGC TGCAGGCGCG CGTGATCGAC
CAGACCGGCA CGCTGAACGA CGCGCAGCGC CAGAGGCTGG AGGCGCGGCT GGCCGCCATC
GAGCAGCAGC ACGGCTCGCA GGTGGTGGTG CTGATGGTGC CCACCACCGC GCCCGAGGAC
ATCGCCGCCT TCGCCAACCG CGTGAGCAAC GCCTGGAAGA TCGGCCGCAA GGACGTGGGC
GATGGCGTGC TGGTGGTCGT GGCCAAGGAC GACCGGCGCA TGCGCATCGA GGTGGCCAAG
GCGCTGGAAG GCGCCATACC CGACATCGCC GCCGCGCGCA TCATCGACGG CGCGATGAAG
CCGCGCTTTC GCGAGGGCGA CTTTGCCGGC GGGCTGGACG CCGCGGTGCA GCAGATCGGC
GCGCGCATCG CGGGCGAAAA CCTGCCCGCG CCGCAAAGCA GCCAGCAAGG CGACGGGCAG
GGCCGCGGCG CGTCCGCGGG CTTTGACTGG ACAGACCTGG CCGTCTTCCT CTTCTTCGGC
GTGATGGTGG CGGGCCCCGT GGTGCGCCGG CTGTTCGGCC AGCGCCTGGG CGGCCTGGTG
ATGGGCGGCG GCGCTGGGTT CCTGGCCTTC ATCGTCACCT CCAGCCTGCT GCTGGCGGGT
GGCGCGGGGC TGCTGGCGCT GCTCTACACC TGGATCTTTG CGGGCCGCGG CGGCCCCGTG
GTGTGGCACG GCGGCGGCTG GGGAGGCGGT CACGGCGGTG GCTGGGGCGG TGGAGGCGGT
GGTGGATTCG GCTCGGGCGG CGGCGGAGAC TTCGGCGGCG GCGGTGCATC GGGCGACTGG
TAG
 
Protein sequence
MPLALALQAL IAIFLVAIGA LPATAQPLRA VPALQARVID QTGTLNDAQR QRLEARLAAI 
EQQHGSQVVV LMVPTTAPED IAAFANRVSN AWKIGRKDVG DGVLVVVAKD DRRMRIEVAK
ALEGAIPDIA AARIIDGAMK PRFREGDFAG GLDAAVQQIG ARIAGENLPA PQSSQQGDGQ
GRGASAGFDW TDLAVFLFFG VMVAGPVVRR LFGQRLGGLV MGGGAGFLAF IVTSSLLLAG
GAGLLALLYT WIFAGRGGPV VWHGGGWGGG HGGGWGGGGG GGFGSGGGGD FGGGGASGDW