Gene Ajs_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0314 
Symbol 
ID4673550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp321893 
End bp322444 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID639837445 
Producthypothetical protein 
Protein accessionYP_984644 
Protein GI121592748 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.513308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACAC CCTCTTCATC CCCACCTTCC GGCGTGCTGG CGCGCCTGAC GCGGCTGCTG 
CGGCACCGTT GGTCCGACGG CGGCCTGCAC CAGGCCCTGC CACCCGAGGT GCTGGAGCGC
CTGGGCCAGC GCGTGGCCGC CAGCGAGCGC CGCCACACCG GCCAGATCCG CATCTGCGTG
GAAGGCGGCC TGCCGCTGTC GTACCTGTGG CGCGGCGCCA CGGCGCGCGA GCGCGCGGTC
ACGCAGTTCG GCAAGCTGCG TGTGTGGGAC ACCGAACACA ACAACGGCGT GCTCATCTAC
CTGATGCTGG CCGAGCATGC CATCGAGATC GTGGCCGACC GCGCTCTAGC GCGCCGCGTG
CCCCCGGCGA CATGGCGCAG CATGGTGTCG CACATGGCCG AGGCTTTCCG CCAAGGCCGG
TACGAGGACG GTCTGACCCA GGCGCTGAGC GAGGTCTCTG CGCTGCTCGT GGAGCACTTC
CCGGCCACCG AGGGCGTGGA CCGGCCGAAC GAGCTGCCCG ACGCTCCCGT CATCCCGGGC
ACGGTGGACT GA
 
Protein sequence
MVTPSSSPPS GVLARLTRLL RHRWSDGGLH QALPPEVLER LGQRVAASER RHTGQIRICV 
EGGLPLSYLW RGATARERAV TQFGKLRVWD TEHNNGVLIY LMLAEHAIEI VADRALARRV
PPATWRSMVS HMAEAFRQGR YEDGLTQALS EVSALLVEHF PATEGVDRPN ELPDAPVIPG
TVD