| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0312 |
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| Symbol | |
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| ID | 4673529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 318254 |
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| End bp | 321166 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639837443 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_984642 |
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| Protein GI | 121592746 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.342064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTGGC CGCGCGGTGC AACGGGGGGT GCCGTGACCG CCCCGCGCTT CCCCCTCGCA
ACCGGCTGGC TGGCCACGCG CGGCTGGGCG CCATTCGCCT TCCAGCGCCA GGTGTGGCGC
GCCATCGCGC AGGGACGCTC GGGCCTGCTG CATGCCACCA CGGGCGCCGG CAAGACTTAC
GCGGTGTGGC TCGGGGCGCT GCAGGCCTTT GCGGACTGGG AGTCAAAACG GCCTGTAGCG
CCCGTCCATT CAGCGCTGCA CGCTATAAAT AACGAAGCAG CACCGCGGAC CGTACCACTC
ACCGTGCTGT GGATCACGCC CATGCGCGCG CTGGCCGCCG ACACGCTGCG TGCGCTGGCG
GCGCCGCTGC AGGCCCTGGC CGCACAGCAT GCCGGCCTGG CGCGCTGGAG CCTGGGCGCA
CGCACGGGCG ATACCGGCAG CGCCGAACGC AGCGCCCAGG CGCGGCGTCT GCCCACGGTG
CTCGTCACCA CCCCCGAAAG CCTGTCGCTG CTGCTGGCGC GCGCGGACGC GCGCGAGCAA
CTGGCCCGCG TGCGCCTGGT GGTGGCGGAT GAATGGCACG AGCTGCTGGG CAACAAACGC
GGCGTGCAGG TGCAGTTGGC GCTGGCGCGG CTCGCGGGCT GGAACCCGCG GCTCCTGGTC
TGGGGCATGT CGGCCACGCT GGGCAACCTG CCCGAGGCCA TGCAGACGCT GCTGGGCCGG
GAGGGCGGCA CGCTGGTGCG CGGCCGCGTG GAAAAGCGCC TGGTGGTGGA CACCCTGCTG
CCCGAGCGGC CCGAGCGCTT CACCTGGGCC GGTCACCTGG GCCTGGCCAT GCTGCCGGCG
GTGGTGCGCG CGCTGGAGGA GTCGCCCGGC ACCACGCTGG TGTTCGTCAA CGTGCGCTCG
CAGGCCGAGC AGTGGTACCA GGCGCTGCTG GACGCGCGGC CGGACTGGGC GGGGCAGATC
GCCATCCACC ACGGCTCGCT GGACCGTGCT GTGCGCGAAT GGGTGGAGGC GGGGCTCAAG
AGCGGCAGCC TGCGCGCCGT GGTCTGCACC AGCAGCCTGG ACCTGGGTGT GGACTTCCTG
CCGGTACAGC GCGTGCTGCA GATCGGCTCG GCCAAGGGCG TGGCGCGCCT GCTGCAGCGC
GCCGGCCGCT CGGGCCACGC ACCAGGGCGG CCCTCGCGCA TCACGCTGGT GCCCACGCAC
AGCCTGGAGT TGGTGGAGGC CGCCGCCGCG CGCGCCGCGG TGCATGCCGG GCGGGTGGAA
AAGCGCGTCT CGCCGCACCA GCCTGTCGAC GTGCTGGTGC AGCACCTGGC CACGGTGGCG
CTGGGCGGGG GCTTCGAGCC CGAGGCGCTG TATGCCGAGG TGCGCCGCAC GGCCGCGTAC
CGCGCGCTGC CGCGCGGCGT GTGGCAGTGG TGCCTGGACT TCGTTGCGCG TGGCGGCAGC
GCCCTGGCGG CCTACCCGGA CTACTGCCGT GTCGTGCCGG ACGAGAACGG TGTGTGGCGC
CTGCCCGATG CGCGCCTGGC ACGCCGCCAC CGCGCCAACA TCGGCACCAT CGTGAGCGAT
GCCAGCATGC AGGTGCAGAT CCTGCAGGGC GCTCGCCTGG GCGCGGTGGA AGAGGGCTTC
ATCGCGCGGC TGTCGCCGGG CGATTGCTTC GTGTTCGCCG GGCAGGTGCT GGAACTGGTG
CGCACGCGCG AGATGACCGC CTTCGTGCGG CGCGCGCCGG GGCGGCAGCC CACGGTGCCG
CGCTGGAACG GCTCGCGCAT GCCGCTGTCC ACCGTGCTGG CCGACTACGT GGTGCAACAG
CTCGCGCAGG CGGGGCGGGG CCGCTACGCC AGCCCCGAGC TGCGCGCCGT GCGCCCGCTG
CTGGAGGTGC AGCGCCGCTG GTCCGCCCTG CCCACGCCGG GCACGCTGCT GGCCGAGACG
CTGCGCACGC GCGAGGGCTG GCACCTGTTC CTCTACCCGT TCGCCGGCCG GCATGCGCAC
ATCGGGCTGG CCAGCCTGTT CGCCTGGCGC GCGGCCCAGG GGGTGCCGGG CACCTTCTCG
ATCGCCGTGA ACGACTATGG ATTGGAGCTG CTGTCCGCCA CAGAACGCGA CTGGCCGGCC
TTGCTGCCCG ACCTGCTGCG CACCGACGCC GCCGCGCCGC AGGCCGCCCG GCAGGCGCAC
GCCCTGGCGC CCGACGAGGC GCTGGCCATC CGCAACACTG CCAACGCCAC GGCGCCCGAG
TCGGTGCCGC AAGAGCGTGA CGCGCGCGCA GCGTTGCTGC ACGAGGTGCT AGCCAGCCTC
AACGCCACTG AAATGGCGCG CCGGCGCTTT CGCGAGATTG CGCGCGTGGC GGGGCTCATC
TTTCAAAGCC ACCCGGGCGA GCAGCGCAGT GCGCGCCAGC TGCAGGCGTC TTCCCAGTTG
TTCTTCGAGG TCTTTCGGCG TTATGACGCG GGCAACCTGC TGCTGCGCCA GGCCGACCAG
GAAGTGCTGA GCCAGGAGCT GGACGTGGCA CAGCTGCTGG CGACGCTCAC ACGCATGCAG
GCGCAGCAGC TCATGGTGCA GCCTCTCGTG CGACCCGGGC CGCTGGCCTT TCCGCTGATG
GTGGAGCGCT TTCGCGAGCA GCTCAGCAAC GAGGCGCTGG CCGACCGCAT CGCGCGCATG
CTGGGCGACA TGGAAGCCGC CGCCAGCGCG CGCAAACCCG TACCCGCCCC ACCGGTGCAG
GACGTCGTGC CCCCTGACCC GCCGCGCCGC CGGCGCGCCG CCCCCCCGGC CGCGCCACCG
CGGCAGGAAG CATCGTCCGC CGTCACCGAC GCACTGCGCG GCACGCTGGA CTTTGCCGAT
GCCTCCGAGG GCACGGGCGC CGCGCCGGCC GCGGCGCGGG GCCGTTCCCC GCGCCGCGCG
CGCAAACCTT CGCGCCCGTT GCCGCGCCTG TGA
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| Protein sequence | MPWPRGATGG AVTAPRFPLA TGWLATRGWA PFAFQRQVWR AIAQGRSGLL HATTGAGKTY
AVWLGALQAF ADWESKRPVA PVHSALHAIN NEAAPRTVPL TVLWITPMRA LAADTLRALA
APLQALAAQH AGLARWSLGA RTGDTGSAER SAQARRLPTV LVTTPESLSL LLARADAREQ
LARVRLVVAD EWHELLGNKR GVQVQLALAR LAGWNPRLLV WGMSATLGNL PEAMQTLLGR
EGGTLVRGRV EKRLVVDTLL PERPERFTWA GHLGLAMLPA VVRALEESPG TTLVFVNVRS
QAEQWYQALL DARPDWAGQI AIHHGSLDRA VREWVEAGLK SGSLRAVVCT SSLDLGVDFL
PVQRVLQIGS AKGVARLLQR AGRSGHAPGR PSRITLVPTH SLELVEAAAA RAAVHAGRVE
KRVSPHQPVD VLVQHLATVA LGGGFEPEAL YAEVRRTAAY RALPRGVWQW CLDFVARGGS
ALAAYPDYCR VVPDENGVWR LPDARLARRH RANIGTIVSD ASMQVQILQG ARLGAVEEGF
IARLSPGDCF VFAGQVLELV RTREMTAFVR RAPGRQPTVP RWNGSRMPLS TVLADYVVQQ
LAQAGRGRYA SPELRAVRPL LEVQRRWSAL PTPGTLLAET LRTREGWHLF LYPFAGRHAH
IGLASLFAWR AAQGVPGTFS IAVNDYGLEL LSATERDWPA LLPDLLRTDA AAPQAARQAH
ALAPDEALAI RNTANATAPE SVPQERDARA ALLHEVLASL NATEMARRRF REIARVAGLI
FQSHPGEQRS ARQLQASSQL FFEVFRRYDA GNLLLRQADQ EVLSQELDVA QLLATLTRMQ
AQQLMVQPLV RPGPLAFPLM VERFREQLSN EALADRIARM LGDMEAAASA RKPVPAPPVQ
DVVPPDPPRR RRAAPPAAPP RQEASSAVTD ALRGTLDFAD ASEGTGAAPA AARGRSPRRA
RKPSRPLPRL
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