Gene Ajs_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0295 
Symbol 
ID4673347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp303300 
End bp303749 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID639837426 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_984625 
Protein GI121592729 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000182968 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACGC GCCTTCTCAT CATCGCCCAC GCCCCTTTGG CCCATGCGCT GCGTGAATGC 
GCGCTGCACG TGTTCCCCGA CTGCTGGCAG GAGGTGCTGG CGCTGGACGT GCCGCCCCAT
GAGGCCCCCG AGGCCACGCT GTCGGCCGCC CGCGCGCTGA TGGAGCAGCA GGGCGAAGCC
TCGGTGCTGG TGCTGAGCGA CTTGTTCGGC GCCACGCCCT GCAACGTGGC CCAGCGGCTG
GTGGACGGCC TGCAGTCCCG CCTGGTGGCG GGCGTGAACC TGCCCATGCT GCTGCGCGCC
GTGAGCTACC GTAGCGAGCC GCTGGATGCG CTGGTGGCAC GCGCCCTCGT GGGTGGCACG
CAGGGCGTGA TGCAGGTGGG CGCGGCCGCG CCGCAGAATC AAAACCGACG TCCGTCTCAT
GATCAAGAAG AACATCACCA TCAGCAATAA
 
Protein sequence
MNTRLLIIAH APLAHALREC ALHVFPDCWQ EVLALDVPPH EAPEATLSAA RALMEQQGEA 
SVLVLSDLFG ATPCNVAQRL VDGLQSRLVA GVNLPMLLRA VSYRSEPLDA LVARALVGGT
QGVMQVGAAA PQNQNRRPSH DQEEHHHQQ