Gene Ajs_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0290 
Symbol 
ID4673120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp299343 
End bp300011 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID639837421 
Productcytochrome B561 
Protein accessionYP_984620 
Protein GI121592724 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000341868 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCACA CCGTACGCAT CTGGGATTTG CCGACCCGGC TGTTCCACTG GTCGCTCGCC 
GTGACCACCG TCGCCCTGGT CGTCACCGCC AAGCTGGGCG GCAACGCCAT GCAGTGGCAT
CTGCGGCTGG GCTACGTGAT GCTGGCGCTG CTGGCCTTTC GCCTGGCCTG GGGCCTGGTG
GGCGGACGCT GGTCGCGTTT TGCGAGCTTC CTACCCACAC CCGCGCGCCT GCGCAGCCAC
TTCGCCAACC AGGAAGGCAA GGTGACCAGC CCCGGCCATT CGCCGCTGGG CGCACTGTCG
GTCTTTGCCC TGCTGGCGGT GCTGCTGGCC CAGGTAGGCA CCGGCCTGCT GAGCGACGAC
GAGATCGCCT TCGCCGGTCC GCTCACGCGT TTCGTTTCTG GCGAGTGGGT ATCGCAGGCC
ACTTGGTATC ACAAGGACGT GGGCCAATTC CTGCTGTTGG GGCTCGTCGC GCTGCACCTG
GCGGCGATTG TTTTCTATAC CCTGGTGCGC CGTCAGGCCC TGGTGGGCCC CATGGTGCAC
GGCGATCGTC AACTGCCCGG GGCCACACCC GCGTCGCGCG ACGATGCGCT CAGCCGCGCA
GGGGCGGCCC TTGTGGCGGC TCTGAGCGCG CTGCTGGCCT GGTGGGTCGC CAGCCTGGGG
GCTTTTTGA
 
Protein sequence
MPHTVRIWDL PTRLFHWSLA VTTVALVVTA KLGGNAMQWH LRLGYVMLAL LAFRLAWGLV 
GGRWSRFASF LPTPARLRSH FANQEGKVTS PGHSPLGALS VFALLAVLLA QVGTGLLSDD
EIAFAGPLTR FVSGEWVSQA TWYHKDVGQF LLLGLVALHL AAIVFYTLVR RQALVGPMVH
GDRQLPGATP ASRDDALSRA GAALVAALSA LLAWWVASLG AF