| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0284 |
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| Symbol | rpsC |
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| ID | 4672977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 296248 |
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| End bp | 297114 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639837415 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_984614 |
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| Protein GI | 121592718 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.128971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000454249 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGACAGA AAATCCATCC TACCGGCTTT CGCCTTTCGG TCAGCCGCAA CTGGGCCAGC
CGCTGGTATG CCAGCAACCG TGACTTCGCC GGCATGCTGG CCGAAGACAT CAAGGTGCGC
GAGTACCTGA AGGCCAAGCT GAAGAACGCC GCCGTGTCGC GCATCCTGAT CGAGCGTCCT
GCCAAGAACG CCCGTATCAC GATCTTCTCG GCACGTCCCG GCGTGGTGAT CGGCAAGAAG
GGCGAGGACA TCGAGAACCT GAAGAAGGAA CTCGCAACCC GCCTGGGCGT GCCTGTCGCC
GTGAACATCG AAGAAGTGCG CAAGCCCGAA ATCGATGCCA AGCTGATCGC CGACTCGATC
ACCCAGCAGC TGGAAAAGCG CATCATGTTC CGCCGCGCCA TGAAGCGCGC CATGCAGAAC
GCGATGCGCC TGGGCGCCCA GGGCATCAAG ATCATGTCCT CGGGCCGTCT GAACGGCATC
GAAATCGCCC GTACCGAGTG GTACCGCGAA GGCCGTGTGC CGCTGCACAC ACTGCGCGCC
GACATCGACT ACGGCACCTC CGAAGCCAAG ACCACCTATG GTGTGATCGG CGTGAAGGTG
TGGGTCTACA AGGGCGACAC GCTGGGCCGC AACGATCTGC CCGCCGCCGA GACGCCGCGT
CCTGAAGAAG AGCGCCGTCC CCGTGGCCCG CGCCGCGATG GCCGCCCAGG CGACCGCGCC
GGTGCTGGCC GTGGCGGCCG CCGCCCGATG GGCACCAATG CAGCCCCTGC CGACGGTAGC
GACAAGCCTG CCGGCGCTGG TGGCGATTCC GTTAAGCGCG TCAAGAGCGC GCCCGCTGCC
GCAGCGGCGG ACGGTAAAGG AGAATAA
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| Protein sequence | MGQKIHPTGF RLSVSRNWAS RWYASNRDFA GMLAEDIKVR EYLKAKLKNA AVSRILIERP
AKNARITIFS ARPGVVIGKK GEDIENLKKE LATRLGVPVA VNIEEVRKPE IDAKLIADSI
TQQLEKRIMF RRAMKRAMQN AMRLGAQGIK IMSSGRLNGI EIARTEWYRE GRVPLHTLRA
DIDYGTSEAK TTYGVIGVKV WVYKGDTLGR NDLPAAETPR PEEERRPRGP RRDGRPGDRA
GAGRGGRRPM GTNAAPADGS DKPAGAGGDS VKRVKSAPAA AAADGKGE
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