| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0273 |
|---|
| Symbol | rpsL |
|---|
| ID | 4672835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 287915 |
|---|
| End bp | 288292 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639837404 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_984603 |
|---|
| Protein GI | 121592707 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0102222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000133028 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCA TTAACCAACT CGTGCGTCAG GGCCGCACGG TCGAAGTTGT CAAATCCAAA
AGCCCTGCTA TGGAAAACTG CCCCCAGCGC CGTGGCGTGT GCACCCGTGT GTACACCACG
ACGCCGAAGA AGCCTAACTC CGCTCTGCGT AAGGTCGCCA AGGTGCGCCT GACCAACGGT
TTCGAGGTGA TCTCCTACAT CGGCGGTGAA GGCCACAACC TGCAAGAGCA CAGCGTGGTG
CTGGTGCGCG GCGGTCGTGT GAAGGACTTG CCCGGTGTGC GTTACCACAT CGTGCGCGGT
TCGCTGGACC TGCAAGGCGT CAAGGATCGC AAGCAGGCCC GCTCCAAGTA CGGCGCGAAG
AAGCCCAAGG CCAAGTAA
|
|---|
| Protein sequence | MPTINQLVRQ GRTVEVVKSK SPAMENCPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVISYIGGE GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQARSKYGAK
KPKAK
|
|---|
| |