| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0259 |
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| Symbol | |
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| ID | 4672352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 273793 |
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| End bp | 274539 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639837390 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_984589 |
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| Protein GI | 121592693 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00759419 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAGA TTGTTCTGAT CACCGGCGGC AGCCGGGGCA TCGGCGCTGC CGCCGCCGTA
CTGGCCGCGC AGCGCGGCTG GGCCGTGGCC ATCAACTACC TGCGCCACGC CGAGGCCGCG
AACGGCGTGG TGCGCCAGAT CGAGGCCGCG GGCGGGCGCG CCATCGCGGT GCAGGCCGAT
GTGGCGGTGG AGGCCGACGT AGTGACTTTG TTCGAGACCG TGGACCACCG CCTGGGGCGC
CTCACGGCAC TGGTGAACAA CGCGGGCGTG GTGGACCGCC CTGCCCCCGT GGACGAAATG
CACGGCGAGC GCCTGCGGCG CATGTTCAGC ATCAACGTGC TGGGCGCCTT CTACTGCGTG
CGCGAGGCGG TGCTGCGCAT GAGCACGCGC CATGGCGGTG CCGGTGGCAG CATCGTCAAC
GTGTCCAGCA TCGCGGCCCG GCTGGGTGCA CCCCATCAGT ACGTGGACTA TGCGGCGTCC
AAGGGCGCGC TGGACACGCT CACCATAGGC CTGGCGCACG AGGTGGGCGG CGAGGGCATC
CGCGTGAATG CCGTGCGCCC CGGCCTGATC GACACCGATA TCCACGCCAG CGGCGGCCTG
CCCCACCGCG TGCGCGACCT GGCAGGCCAG GTGCCCATGG GGCGCGGCGG CACGCCCGAG
GAAGTGGCCG AGGCCATCGT GTGGCTGATG TCGGACGCGG CCAGCTACAC CTCGGCCACG
CTCATGGACA TTGCCGGGGG CCGCTGA
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| Protein sequence | MDKIVLITGG SRGIGAAAAV LAAQRGWAVA INYLRHAEAA NGVVRQIEAA GGRAIAVQAD
VAVEADVVTL FETVDHRLGR LTALVNNAGV VDRPAPVDEM HGERLRRMFS INVLGAFYCV
REAVLRMSTR HGGAGGSIVN VSSIAARLGA PHQYVDYAAS KGALDTLTIG LAHEVGGEGI
RVNAVRPGLI DTDIHASGGL PHRVRDLAGQ VPMGRGGTPE EVAEAIVWLM SDAASYTSAT
LMDIAGGR
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