| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0257 |
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| Symbol | |
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| ID | 4672336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 272219 |
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| End bp | 273151 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639837388 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_984587 |
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| Protein GI | 121592691 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.929741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0241212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGC ATGAACCACC CGAAAGCGCG CTTTATCGCA CCCTGCTCGA ATCCACGCGC
GCCATTCCGT GGAAGATCGA CTGGGCCACG GCGACCTTTG CCTACATCGG GCCGCAGATC
GAGGACCTGC TGGGCTGGGC GCCCACCAGC TGGCGCACCG TGCAGGATTG GGCCGACCGC
ATGCACCCCG ACGACCGGGA CCGGGTGGTC AACTTCTGCA TTTCGCAGTC CCAGTCGGGC
GTGGACCACG AGGCGGACTA CCGCGCGCTC ACCACAGGCG GGGATTACGT ATGGATCCGC
GACGTGGTGC ATGTGGTGCG CGACTTGCAG GGCAATGTGG TGTCGCTCGT GGGCTTCATG
TTCGACATCA CCGAGCGCAA GCAGAACGAG CACCAGTTGC TGCAACTGCA GCAGGTGCTG
CAGGAACTGT CATTCCGCGA CGGGCTCACG GGCGTGAACA ACCGCCGCAA GTTCGACGCG
GAGTACGAGC GCGAATGGCA GGAGGCGCAG CGCACCGGCG AGCCGCTGTC GCTGCTGATG
TTCGACGTGG ATTTCTTCAA GAGCTACAAC GACCAGTACG GCCACGTGGA GGGCGACGAG
TGCCTGCGGC GCGTGGCCCG CGCGCTGCAG CAGGCCGCCC ACCGCCCGCG CGACTGCCTG
GCGCGCTACG GGGGCGAGGA GTTCGTGCTG CTGCTGCCCG GCGCGGATGC ATCTTCCGCG
CGCGCGGTGG CGCAGCGCTG CATGCAGGAG GTGGCCCACG CCGGCATCGT CCATGCGGCT
TCGCCCCTGG GCCAGCAGCT CACGGTGAGC GTGGGCATGG GCACGGCCCT GCCCGGCACG
CAGGATGACT CCAAGCGGTT CCTGGAAACG GTGGACCGCT GCCTTTACCG TGCCAAGCAC
GCGGGGCGCA ACCGCATCGA GGCCACGGCC TGA
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| Protein sequence | MTPHEPPESA LYRTLLESTR AIPWKIDWAT ATFAYIGPQI EDLLGWAPTS WRTVQDWADR
MHPDDRDRVV NFCISQSQSG VDHEADYRAL TTGGDYVWIR DVVHVVRDLQ GNVVSLVGFM
FDITERKQNE HQLLQLQQVL QELSFRDGLT GVNNRRKFDA EYEREWQEAQ RTGEPLSLLM
FDVDFFKSYN DQYGHVEGDE CLRRVARALQ QAAHRPRDCL ARYGGEEFVL LLPGADASSA
RAVAQRCMQE VAHAGIVHAA SPLGQQLTVS VGMGTALPGT QDDSKRFLET VDRCLYRAKH
AGRNRIEATA
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