Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0253 |
Symbol | |
ID | 4672308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 269592 |
End bp | 270269 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639837384 |
Product | putative lipoprotein |
Protein accession | YP_984583 |
Protein GI | 121592687 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0648241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACTA TCAAAAAGAT AGCTGCTAGC GCTTATCAGA TAAGCGCTAA GGCCATATTT TGCTTAGCAT CCCTGGCCCT GGTGGCGGGC TGCTCCATCC TCCCCGAGCC GCCGGTGCGC GCCGATGTGT ACGACTTCGG CCCCGGTCCC TTGCAGGCGC CGGGCCCCGC GGCCAGCGCG CCGCTGCCGC CGATCGCGCT GGCCGAGGTG ACCGCCACGG GCCTGCCCGA GGGCAGCACC GCGCTGCTGT ACCGGCTGGC CTATACCAAC GCCCAGCAAC TGCGCCCCTA CACCCAGGCG CGCTGGAGCC TGCCGCCCGC CGTGCTGCTG CACCAGGCGG TGCGCGAGCG CCTGGGCCAG CGCCGCGCGG TGCTCTCTGG CGACGACGGC ATGGCCGTGT TGCTGGAGCG CGGCCGCATG CCCAGCGTGC TGCGCCTGGA GCTGGAGGAG TTCAGCCATG TGTTCGGCGC GCCCCAGGCG AGCGCCGGCC TGGTGCGTGT GCGCGCCGTG CTGGCCGACG CGAGCACCGC GGGTGAGACG CTGGTCGCGC AGCGGGTGTT CGTGGCGCGG CGCGATGCCG CCACGCCCGA TGCCGCCGGC GGCGCCAAGG CCCTGGCCGA TGCGGCGGCC CAGGTGGCCG AGGAGCTGGC CGCATGGGTG GAGCAGTCCG GCCGCTGA
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Protein sequence | MMTIKKIAAS AYQISAKAIF CLASLALVAG CSILPEPPVR ADVYDFGPGP LQAPGPAASA PLPPIALAEV TATGLPEGST ALLYRLAYTN AQQLRPYTQA RWSLPPAVLL HQAVRERLGQ RRAVLSGDDG MAVLLERGRM PSVLRLELEE FSHVFGAPQA SAGLVRVRAV LADASTAGET LVAQRVFVAR RDAATPDAAG GAKALADAAA QVAEELAAWV EQSGR
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