| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0249 |
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| Symbol | |
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| ID | 4672265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 264603 |
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| End bp | 266312 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837380 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_984579 |
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| Protein GI | 121592683 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.356601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGATCGG CATCCATGAG CGACACCACT TTCGACTACA TCATCATCGG CGGCGGCACC
GCCGGCGCCC TGCTGGCCAA CCGGCTCAGC GCAGACCCCA AGAACCGTGT GCTGCTCGTG
GAGGCCGGCC GCAGGGACGA CTACCACTGG ATCCACATCC CCGTGGGCTA CCTGTATTGC
ATCGGCAACC CGCGCACCGA CTGGCTCTAT CACACCGAGG CCGACACCGG CCTGAACGGC
CGCAGCCTGC GCTACCCGCG CGGCAAGGTG CTGGGCGGCT GCAGCAGCAT CAACGGCATG
ATCTACATGC GTGGCCAGGC GCGCGACTAC GACCAGTGGG CCCAGATCAC GGGCGACGAC
GCCTGGCGCT GGGACAACGT GCTGCCGGCC TTTCGCCGCC ACGAGGACCA CTGGCGCCTG
GACCAGCCCG AGGGCGTGAA CGAGAACTTC AAGCGCCTGC ACGGCAGCAA GTCCACGGGC
AGCTCGGGCG AGTGGCGCGT GGAAAAGCAA CGCCTGCGCT GGGACATCCT CGACGCCTTC
GCCCAGGCCG CGCAGCAGGC CGGCATTCCC GCCACCGACG ACTTCAACCG CGGCACCAAC
GAGGGCGTGG GCTATTTCGA GGTCAACCAG AAGAACGGCT GGCGCTGGAA CACGGCCAAG
GCCTTCCTGC GCCCCACCTG CTACGGGCGG CCCAATTTCG AGATGTGGAC CTCGGCCCAG
GTGACGCGCC TGGTACTGGA CCGTCAGCCG GACGGCAGCC TGCGCTGCAC CGGCGTGCAG
GTGTGGACCG GCGAGGAGAT GGTCACGGCC CACGCGCAGC AGGAGGTGAT CCTGAGCGCC
GGCGCGGTGA ACTCGCCACA GATTCTGCAG CTGTCGGGCA TCGGCCCCGG CGCGTTGCTG
CAGCGGCACG GTATCGACAT ACAGGCCGAC CTGCCCGGCG TGGGCGCCAA CCTGCAGGAC
CACCTGCAGA TCCGCGCCGT GTACAAGGTG CAAGGCGTGC CCACACTGAA CATGCTGGCG
GGCAACCTGC TGGGCAAGGC CAGGATCGGC CTGGAATACG CCTTCAAGCG CAGCGGCCCG
ATGAGCATGG CACCGTCGCA ACTGGGCGCC TTCACACGCA GCCAGCCGGA CCTGCCGCAC
CCCAACCTTG AGTACCACGT GCAGCCCCTG TCGCTGGAGG CCTTCGGCGA GCCGCTGCAC
CGCTTCCCGG CCTTCACGGC CAGCGTGTGC AACCTGAACC CCACCAGCCG CGGAACCATC
CAGATCAAGA GCCCGGACTT CCGCACCGCG CCGGCCATCG CTCCCAACTA CCTGTCCACG
CCCGAGGACC GCCAGGTGGC CGCCGACAGC CTGCGCGTCA CGCGCCGCAT CGTGGCCCAG
CCCGCGCTGG CTCCCTACCA GCCCGAGGAA TACAAGCCCG GCCCGCAGTA CCAGAGCGAC
GAAGACCTCG CCCGGCTGGC GGGCGATATC GCCACCACCA TCTTCCACCC CGTGGGCACT
ACGCGCATGG GCCGGCTGGA CGATCCGCAG GCCGTGCTGG ATGCGCGCCT GCGCGTGCGC
GACGGCCGCG GCGGCGTGGT GGCCGGCCTG CGCGTGGTGG ACGCGGGCGC CATGCCCACC
ATCACCAGCG GCAATACCAA TGCACCCACG CTGATGATGG CCGAGATGGC CGCCCAATGG
ATTCGCAGCG AGGCGCGTGC CCCAGTTTGA
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| Protein sequence | MRSASMSDTT FDYIIIGGGT AGALLANRLS ADPKNRVLLV EAGRRDDYHW IHIPVGYLYC
IGNPRTDWLY HTEADTGLNG RSLRYPRGKV LGGCSSINGM IYMRGQARDY DQWAQITGDD
AWRWDNVLPA FRRHEDHWRL DQPEGVNENF KRLHGSKSTG SSGEWRVEKQ RLRWDILDAF
AQAAQQAGIP ATDDFNRGTN EGVGYFEVNQ KNGWRWNTAK AFLRPTCYGR PNFEMWTSAQ
VTRLVLDRQP DGSLRCTGVQ VWTGEEMVTA HAQQEVILSA GAVNSPQILQ LSGIGPGALL
QRHGIDIQAD LPGVGANLQD HLQIRAVYKV QGVPTLNMLA GNLLGKARIG LEYAFKRSGP
MSMAPSQLGA FTRSQPDLPH PNLEYHVQPL SLEAFGEPLH RFPAFTASVC NLNPTSRGTI
QIKSPDFRTA PAIAPNYLST PEDRQVAADS LRVTRRIVAQ PALAPYQPEE YKPGPQYQSD
EDLARLAGDI ATTIFHPVGT TRMGRLDDPQ AVLDARLRVR DGRGGVVAGL RVVDAGAMPT
ITSGNTNAPT LMMAEMAAQW IRSEARAPV
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